| Id Trinity | TRINITY_DN50471_c0_g1_i18 |
|---|---|
| Name Transcript | Ll_transcript_345991 |
| Sequence | TAATACTATTGCATTTAGCCCCAGACCCAGTGCTATATACCAGCTGCTATCGTCATCAGATGATGGAACTTGTAGATTGTGGGATGCAAGATATTCACAG CGCAATCCACGAATATACCTGCCTAAACCTCCAGATGCTACAACTGGTCAGACCACTGCTTCTTGTTCTGTCAACAGGCCGAGTCAATATGGTCTGGGTT TTGCGTTATTACCATACTAAATTGAATATGGTGCTACAGTATGTTTGGTCTTGGAGTTTGGATCAATTAGATTTTATTAATATCATAGGTTTTTTGAGGA TTGTGCTGTTCTTCATTGTCTAAGTCTAGTAAATGCTAGAATTTTGAGGACTTTTTCTATCCTAGACTGCATATGGAATAGGGTTTCTTATTTGGTCTCT GGTGTTCTGCACATGGTCTCTTAGGGGTGCTTCTTTGTTAGACATGCAAAGATTCTGACATGCTTTTGTTGCATGAATTAATCTCATTTTTTGTGGGTGA GGATTCCTTATCCTCTTCTTTTATCTTCTCATCTAATAAGTTTTCTGTTCATATAAAAAAAGAGTCTAAATCCAGTAAGAAAAACATTTTACAGTAAAAT ATTTCTTATTCTAAATGCATACCTCATTTTAGAACTATGGATGGAATTATAATATCTGGTGTAAATCAAAATCTGGCCTTCATTGTGTTATCTGTGCTGA ATGCACTGAGCAAGCATGTTAGAACCCTCAAAATGGTCAAAAGCTAGTATTTTTTAATTAAAAAAATGGTTTTTTTAACATGGCCCCTCAAACAATGGTG TTTTTTGAGCCTAGCTCTGCCATTGTGAATGTAAGTATGGACATGCAAATCATTCTTTTCTCACTTAAAGTGCCTTTTAGATCAGTAGTCTGACCTGTTG ACTGCGATAGTTGTGTTTTACTAGGTTATTCTTAATTAATTATAGGATTGGTTGACCAATTATTTAATTTTGTAGGGAAGAGCAATGCTCCACCAACTAA TCAACCATCTTCAAGTAATGGTCAACAACGCTATCAGATACTTTGTTGTGCATATAATGCAAATGGAACTGTTTTTGTTACCGGAAGCTCTGACACATAT GCCAGGGTGTGGAGTGCTTTTAACTTTAAGCCCAACTCTGATGATTCTGATCAACCTATACATGAGATGGATGTATTAACTGGCCATGAGAATGATGTTA ATAATGTACAATTTAGTGGTTGCTCTGTGGCTTCAAAATTTTTGACGTCCGACTCTTGGAAAGAAGAAAATACCATGAAGTTCCGAAATTCCTGGTTTTG TCATGATAACATAGTTACGTGCTCTCGTGATGGAAGTGCAATTATATGGGTTCCTAGATCTCGTAGGTCCCATGGGAAAGCTTTACACTGGACTCGTGCA TATCATCTAAAGGTGCCACCACCACCTCTGCCTCCTCAACCTCCAAGAGGGGGACCAAGGAAGAGATTTCTACCTACTCCCCGCGGTGTCGACATGATTG TATGGAGTCTGGACAACCGCTTTGTACTTGCAGCTATAACGGATTGCAGAATATGTGTTTGGAATGCAGTTGATGGCAGCTTAGTGCACTCTTTGACTGG TCACACTGCATCTTCTTATGTTTTGGATGTTCATCCTTTCAATCCTCGTATAGCTATGAGTGCTGGGTATGATGGACGGGCCATTGTGTGGGATATATGG GAGGGCGTACCTATCCGGATATATGAAATTGGGCGTTTTAAGTTGGTCGATGGGAAGTTTTCTCCGGATGGAACGTCAATCGTCCTTTCAGATGATGTTG GCCAAATATATTTTTTGAATACAGGTCAAGGCGAGTCCCAAAAGGATGCAAAATATGATCAGTTTTTTCTGGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_177443; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_345991
| Blastp | PH-interacting protein from Homo with 29.8% of identity |
|---|---|
| Blastx | PH-interacting protein from Homo with 28.37% of identity |
| Eggnog | bromodomain and WD repeat domain containing(ENOG410YCD8) |
| Kegg | Link to kegg annotations (55023) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428466.1) |
| Pfam | WD domain, G-beta repeat (PF00400.31) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |