| Id Trinity | TRINITY_DN50474_c2_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_345378 |
| Sequence | CGTGTGTGTTTGTGGGTTTGATACTGTTCTTTGAAAGTGTTTTCTGTGCAAACTTGAGTTTTCTCATAAGAGTTATGTGCAATGCTGAAAATTTTCTGAA GATTTTCCTTATTTTTTGTTTATGGGGTTGTGGCTGCATTTTCAAAGTGATACTGATATGTTTTGAGAGGGAAGTTGGTAATCTCCGAAAATAGGTTCTG GAATTTTCCGTTTTTGTTTCCATGGTTGACATTTTTCTGTTCTCTGATTCTATGCAATTCTGAAAATGGTATTGGAATTTTCCTTTATGATTTTGGTATT AAGGCTTTGTGTTCTTTGGGGGTTGATTTGTTCGGCATTTATTAGGGTACAGCTGCAACAAAGGTCAAAATGGCGCAGAAAGTGGCTCAGGGGGTTGCTG AGAAAAGAGGAGGAAGAAGGGGTCCTAGCAGTGTAATTGGATCCAGTGTTGCTGGTTGTGTTTGTGCTTTCCTCACCATTTTCGGAGTTGGGGGAGACAC ATTTTCTCAGCTTTGGAGACTTGGGTTTGTTGCTAGTTTCTGTACGAAATTGAGTGATACTGTCGCAAGTGAGATAGGGAAGGCATATGGAAAAACAACG TACCTAGTTACAACATTCAAGGTAGTTCCAAGGGGGACAGAAGGGGCAGTTAGTGTGGAAGGAACCTTGGCTGGATTCTTCGCAGCTATAGTTCTCGCCA TTGTTGCTTGTTTCTTGGGTGAGGTTGGTCGATATGAAGCGGTTATATGTGTATTAGCTTCTCAGATTGCTAATCTCGGTGAGAGCATAATTGGTGCTGC ACTTCAAGAGAAGGAAGGATTTCGATGGCTTAATAATGATGCAGTTAATATCATCAACATATCAATGGGTAGTGTTATAGCAGTCTTGATGCACCAAGCA CTTCAGAGCTGGCATATCTAAATTTGCTGCAAGATTTACTAGGAGCTCAATCTTCACCAACAATCTTGTGACCATTCTTTCAAGTGTCATCATGAAGCAG TCTTTCCTAGAATGAGATTAATGTAGATCAAAGCCCTTCCTACCGATCAAACGTGAGCATATCGGTTGTTAAAAATAATAACAGAACTTGATATAACCCA CAGCCATGATTCAAGTCGCTTGGATTGAAGGCAACGGTTCTTTTAATTGCAGATTTGAAAGGATGACTTCGGTACAATCGAAAGGTTGTTGCTTAGTTGA GACGATGAGTTCGTTGCATATATCGACTCCCCCTAGACCCGGCTAAGTGGAAGTTTCATGCATCGGACCGTCCTTTTTTATATCTTGGTCTAGAGTTCAT ATATACACTCACTGAGGTGCTTCTAAAATGTAGAATGTAGATCTCGAAACTATAGTTGAAGGGTAGGTGCAGGTTTTCATTTTTCAATGATGTGTAGTTA AGTTTTTCATATTTGCATCACATTGTATATACTTTTCTGTATAACTCATTCTAATTTTGACATACAAGCTTAGTGTTATTTTATCTCTCTAATAACTCTG GCATTTAAGAGAGAAAATATCAAATTTGTCTATTGATTTATTGAAAAATATTTGGGTCCATATGCTGTATTATGAGAGATTAATCTCTTGTTAATTGTGG GAAACATATâBLAST |
| Tissue | pods |
| Gene name | LI_gene_177461; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_345378
| Blastp | Protein VTE6, chloroplastic from Arabidopsis with 74.73% of identity |
|---|---|
| Blastx | Protein VTE6, chloroplastic from Arabidopsis with 75.79% of identity |
| Eggnog | Integral membrane protein DUF92(COG1836) |
| Kegg | Link to kegg annotations (AT1G78620) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019454882.1) |
| Pfam | Integral membrane protein DUF92 (PF01940.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |