Ll_transcript_345380

• Id Trinity: TRINITY_DN50474_c2_g1_i4
• Name Transcript: Ll_transcript_345380
• Sequence: CGTGTGTGTTTGTGGGTTTGATACTGTTCTTTGAAAGTGTTTTCTGTGCAAACTTGAGTTTTCTCATAAGAGTTATGTGCAATGCTGAAAATTTTCTGAA GATTTTCCTTATTTTTTGTTTATGGGGTTGTGGCTGCATTTTCAAAGTGATACTGATATGTTTTGAGAGGGAAGTTGGTAATCTCCGAAAATAGGTTCTG GAATTTTCCGTTTTTGTTTCCATGGTTGACATTTTTCTGTTCTCTGATTCTATGCAATTCTGAAAATGGTATTGGAATTTTCCTTTATGATTTTGGTATT AAGGCTTTGTGTTCTTTGGGGGTTGATTTGTTCGGCATTTATTAGGGTACAGCTGCAACAAAGGTCAAAATGGCGCAGAAAGTGGCTCAGGGGGTTGCTG AGAAAAGAGGAGGAAGAAGGGGTCCTAGCAGTGTAATTGGATCCAGTGTTGCTGGTTGTGTTTGTGCTTTCCTCACCATTTTCGGAGTTGGGGGAGACAC ATTTTCTCAGCTTTGGAGACTTGGGTTTGTTGCTAGTTTCTGTACGAAATTGAGTGATACTGTCGCAAGTGAGATAGGGAAGGCATATGGAAAAACAACG TACCTAGTTACAACATTCAAGGTAGTTCCAAGGGGGACAGAAGGGGCAGTTAGTGTGGAAGGAACCTTGGCTGGATTCTTCGCAGCTATAGTTCTCGCCA TTGTTGCTTGTTTCTTGGGTGAGGTTGGTCGATATGAAGCGGTTATATGTGTATTAGCTTCTCAGATTGCTAATCTCGGTGAGAGCATAATTGGTGCTGC ACTTCAAGAGAAGGAAGGATTTCGATGGCTTAATAATGATGCAGTTAATATCATCAACATATCAATGGGTAGTGTTATAGCAGTCTTGATGCACCAAGCA CTTCAGAGCTGGCATATCTAAATTTGCTGCAAGATTTACTAGGAGCTCAATCTTCACCAACAATCTTGTGACCATTCTTTCAAGTGCTTATCTAAACTTT GTTAGAATAGAGCATATGAGCTATGTATTACTCCATCCGAAACCGTCTCGGATTTATACTTCTCGGGTATTTTTCAGGTGTCATCATGAAGCAGTCTTTC CTAGAATGAGATTAATGTAGATCAAAGCCCTTCCTACCGATCAAACGTGAGCATATCGGTTGTTAAAAATAATAACAGAACTTGATATAACCCACAGCCA TGATTCAAGTCGCTTGGATTGAAGGCAACGGTTCTTTTAATTGCAGATGTAAATTTTTGTTTACCTGATTCAGTTTCTTGTCAAGAAATAGAACAGTTTG TTGTATCCCTTTTCTTTGAGACTCCTTTTTTGTTTCTCTTTTATCTTTGGCAGTTGAAAGGATGACTTCGGTACAATCGAAAGGTTGTTGCTTAGTTGAG ACGATGAGTTCGTTGCATATATCGACTCCCCCTAGACCCGGCTAAGTGGAAGTTTCATGCATCGGACCGTCCTTTTTTATATCTTGGTCTAGAGTTCATA TATACACTCACTGAGGTGCTTCTAAAATGTAGAATGTAGATCTCGAAACTATAGTTGAAGGGTAGGTGCAGGTTTTCATTTTTCAATGATGTGTAGTTAA GTTTTTCATATTTGCATCACATTGTATATACTTTTCTGTATAACTCATTCTAATTTTGACATACAAGCTTAGTGTTATTTTATCTCTCTAATAACTCTGG CATTTAAGAGAGAAAATATCAAATTTGTCTATTGATTTATTGAAAAATATTTGGGTCCATATGCTGTATTATGAGAGATTAATCTCTTGTTAATTGTGGG AAACATAT
• Tissue: pods
• Gene name: LI_gene_177461;
• Additional information: details;

Expression of Ll_transcript_345380

FPKM

• PAB: 0.6
• PNAB: 0.1
• PS1: 0
• PS2: 0.3
• PS3: 0.1
• PW1: 0.2
• PW2: 0
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_345380

• Blastp: Protein VTE6, chloroplastic from Arabidopsis with 74.73% of identity
• Blastx: Protein VTE6, chloroplastic from Arabidopsis with 75.79% of identity
• Eggnog: Integral membrane protein DUF92(COG1836)
• Kegg: Link to kegg annotations (AT1G78620)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019454882.1)
• Pfam: Integral membrane protein DUF92 (PF01940.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;