| Id Trinity | TRINITY_DN50475_c2_g7_i5 |
|---|---|
| Name Transcript | Ll_transcript_346874 |
| Sequence | AGCCAATCAGAAACTGAGTATCCTCCACGTGGCAACATAGAAAATGAGTGTCCCAAATGATGATATTATATACAAACCATAACCCAAAAAATAAAGAAAA CATAGGAAGATAAAAAGATAAGAAATGGCAACAACAATAGGAAGAGTTTTAGTTCCTACTAGACTTGTGAGTAATAATACCATTAATGTTACTACCTGCT ATGCTTTCCCTTATCTTCCTCATAGATTCTCCAACACCCTTTCTTCTTCACATTCCCTTAAACATCTTTCAGAGTCCAGAAAATTTTCTCTTCTTCAGAC CAGAGCTTCTTCTTCAGATGAAACATCAACTTCTGTAGATACTAATGAGTTGTTTAATGATTTGAAGGAGAAGTGGGATGCACTTGAAAACAAGTCTACA GTAGTTGTATATGGTGGTGGAGCTATAGTTGCTGTTTGGCTATCTTCAACTCTTGTTGGTGCTCTTAACACAGTTCCCTTGCTTCCTAAGATTTTGGAGT TGGTAGGACTAGGGTACACTGGATGGTTTGTCTACAGATACCTTCTGTTCAAGTCTAGCAGAAAAGAGCTAGTTACAGACATTGAGGATCTGAAGAAGAA AATTGGTGGAAATGAATAAAAGTGTATTACAAGGTAGCAAGTGAAGTTGATGTTCTTTGATCATCAACATTTGTTTTCTTTGTTGTATGTCCTAAATAAG AGTCCTTTGTGTATCAAGTTATCAACCCATTTCAATGTTGTAATAATGTAACAAATTTTATGTTTATGACTGAATGGATGTTATTGTGTATCAGGGTATC GTACGAAGCCACTCACGTGAGAACATTGTGTTATTATGAGAAATGAGAACAATTAACATGAATCATCGTATCTTATTTGAATGATCAAGATTAAAAGATA CTTGTACTTGTCTATCATGTGACCAATAACTGACTTTTAATCATAACAATTCATGATTGGTTGTAAGGCTTAAATTTATTGTACTCACAGTTCTTATATG AGAATGAGAATTGTTCTCACTTGAGTCATCCCCTAAATTCATGAATCAAAATCAGAGTTATGATGAAATGGTTTAAGTCCCTTCCAATTAGACTAACACA TAGATATACAATGGTAGTATATAAAATTTATATAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_177477; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_346874
| Blastp | Protein CURVATURE THYLAKOID 1A, chloroplastic from Arabidopsis with 68.75% of identity |
|---|---|
| Blastx | Protein CURVATURE THYLAKOID 1A, chloroplastic from Arabidopsis with 64.58% of identity |
| Eggnog | NA(ENOG4111YWG) |
| Kegg | Link to kegg annotations (AT4G01150) |
| CantataDB | Link to cantataDB annotations (CNT0000897) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019423922.1) |
| Pfam | CAAD domains of cyanobacterial aminoacyl-tRNA synthetase (PF14159.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |