Ll_transcript_346152

• Id Trinity: TRINITY_DN50476_c0_g2_i12
• Name Transcript: Ll_transcript_346152
• Sequence: CACTGTGTCTGTAATCAAACAAAATCTCTTAACAAGAGAGAGCCGCAGCGAGAGCCAGACAGAACAGACCCATTCTCTTTCCAATTCCTTCACCGTCAAT AATCGCGCCACCACTTTCTTTCTCTACCAAACGACAGCGTTTCAATACCCATTACTTTCGCTCATTTTCCAATGTTCTTTGTCCACTAATTCTCACACGA TTGAGCTTTGGAAAGTTGAAGCATTTGACTAATACCGGATACAAGATCGATTGAGAGTTTATTTTTGGTGTCATTTTGAGTTATTTGTTGAATTAACTCA TTGGAATAACAAGCATGGCAAGCACATTGCATATCTGTGCTGTTAAGAGCACATACCCTATGATTTCAAGGGGAGCATTGCATTGTCAACCTTCGCTGTT GCCATGTCGGATGCGGTTTTCGGCATCTGTTGCTCCAGTTCCTCTTTTGTGTTGTGCAACGAGGTCATTGTCAAGCGAGAGGAATGCGATGACATTCAGT GTCAGTTGCAGTGTGTTAAAGAAGAATAACACCGAGAATGGTAGCTTTTCTGAAACTGAAAGGAGTTTAACTTGTGTCATGAAGTTCGGCGGCTCCTCAG TAGCCAGTGCAGAGAGGATGAGGGAGGTTGCCAGCCTTATACTAAGCTTTCCGGAAGAGAGACCTATAATTGTGCTCTCTGCAATGGGAAAGACAACTAA TTTTCTTTTATTGGCCGGAGAAAAAGCTGTAAGTTGTGGTGTTACTAACGTCGATAGTATTGGTGAGCTTAGCATTATAAAAGACCTGCATCTCAGGACT GTGGATGACCTTGGAGTGGAGAGAAGCGTTATTGGAAAGCATCTAGAAGAATTGGAACAACTTCTGAAAGGGATATCTATGATGAAGGAGTTGACTCCAC GGACTCAAGATTATTTAGTTTCATTTGGAGAGTGCATGTCCACAAGGATCTTTGCTGCATATCTTAATAAATTGGGAGTTAAGGCCCGTCAATACGATGC ATTTGAGATTGGTTTTATAACAACTGATGACTTCACAAATGCGGACATTTTGGAAGCAACATATCCTGCTGTTTCAAAGAGGTTACATGATGATTGGGTC TCTGATCCTGCAATTCCTATTGTTACAGGCTTTCTTGGAAAGGCCCGGAAATCATGTGCAGTAACAACATTGGGTAGAGGTGGCAGTGATTTGACAGCCA CAACAATAGGGAAAGCACTAGGGTTGCCCGAGATCCAGGTATGGAAGGATGTTGATGGTGTTCTGACCTGTGATCCAAATATATGCCCACAAGCAATACC TGTCCCATATTTGACATTTGATGAGGCGGCTGAACTTGCCTACTTTGGTGCTCAGGTTCTGCATCCACAGTCTATGAGACCTGCTAGAGAAGGTGATATT CCTGTTCGGGTTAAAAATTCTTACAACCCTAAAGCTCCAGGTACTCTCATCTCCAGGGAAAGAGATTTGAGCAAGGCAGTATTAACTAGCATTGTCTTGA AACGTAATGTGACCATGTTGGATATAGTAAGCACTCGCATGCTTGGTCAGTACGGTTTCCTTGCTAAGGTATTTTCAACCTTCGAAGATTTAGGCATATC AGTTGACGTTGTAGCCACAAGTGAAGTCAGTATTTCCTTGACATTGGATCCATCAAAGCTGTGGAGCAGAGAGCTAATTCAACAGGAACTTGACTTTGTT GTTGAAGAACTGGAGAAAATTGCAAAGGTGAAACTCCTACAGAACAGATCCATCATCTCTCTCATTGGAAATGTTCAGAGGTCATCGCTAATATTGGAAA AGGTTCTGTAATATATTCTCTCTATTTGAATGTTCCTCCTATATTTATTATTACAACGGTTTACGACGTTTAAAGATTTAATTACCCTTTTTTAAGTAAT CATGCCACTATCGCGGCCGTTGTGTCCCTCCATCTTGGGGATTTATATTCATATTTTGGTTGAGTGTTTTTCATCTTCTGGATCCTCGTGGCATGGTGAA AATCAGCATCATGGAGTAAATTATGTGGTTTATATAATGTGCTTTACAAGCATAAGTTGATTCATTCAACCTGCATGATTATATTCTTCTATAATTAGTG ACTTTTAGCCCTTTTTGTATACTTCAAAAATTATTGAAAGGCCTTTTATTGTAGGCATTTCATGTTCTTCATACTCTTGGGGTCACTGTTCAAATGATCT CTCAGGGTGCATCTAAGGTATTCACTTAATCAACTCTATATTATTCTTAAATATAGTTTCCAGACAATTTTGGGAGCACATCTGCCGTACCACAGAAGGT GCCACTCCATGTGCCAATATTTGTGATTGGTTGAAAAAATGCATTTAAGTTAAAAAAATGATTAAGTATTTTTCTGTCCAATCATAAATAGTGACACATG AAATGGTACACTTTTTTGGTAGAAGATTTCCACCCGACATTTTTGCCTTGTACATAGGGATGGCAAGGGTGCTTAGTCGTTCCCATACCCATACCTATTT GCTGGTAGCGAGTGTTCATGAGTAACAAATGAGTTTTCAAGTTTAA
• Tissue: pods
• Gene name: LI_gene_177485;
• Additional information: details;

Expression of Ll_transcript_346152

FPKM

• PAB: 0.8
• PNAB: 0.8
• PS1: 1.1
• PS2: 0.4
• PS3: 0.6
• PW1: 0.7
• PW2: 1
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_346152

• Blastp: Aspartokinase 1, chloroplastic from Arabidopsis with 81.11% of identity
• Blastx: Aspartokinase 1, chloroplastic from Arabidopsis with 81.48% of identity
• Eggnog: Aspartokinase(COG0527)
• Kegg: Link to kegg annotations (AT5G13280)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430843.1)
• Pfam: Amino acid kinase family (PF00696.27)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;