Ll_transcript_346162

• Id Trinity: TRINITY_DN50476_c0_g2_i20
• Name Transcript: Ll_transcript_346162
• Sequence: CACTGTGTCTGTAATCAAACAAAATCTCTTAACAAGAGAGAGCCGCAGCGAGAGCCAGACAGAACAGACCCATTCTCTTTCCAATTCCTTCACCGTCAAT AATCGCGCCACCACTTTCTTTCTCTACCAAACGACAGCGTTTCAATACCCATTACTTTCGCTCATTTTCCAATGTTCTTTGTCCACTAATTCTCACACGA TTGAGCTTTGGAAAGTTGAAGCATTTGACTAATACCGGATACAAGATCGATTGAGAGTTTATTTTTGGTGTCATTTTGAGTTATTTGTTGAATTAACTCA TTGGAATAACAAGCATGGCAAGCACATTGCATATCTGTGCTGTTAAGAGCACATACCCTATGATTTCAAGGGGAGCATTGCATTGTCAACCTTCGCTGTT GCCATGTCGGATGCGGTTTTCGGCATCTGTTGCTCCAGTTCCTCTTTTGTGTTGTGCAACGAGGTCATTGTCAAGCGAGAGGAATGCGATGACATTCAGT GTCAGTTGCAGTGTGTTAAAGAAGAATAACACCGAGAATGGTAGCTTTTCTGAAACTGAAAGGAGTTTAACTTGTGTCATGAAGTTCGGCGGCTCCTCAG TAGCCAGTGCAGAGAGGATGAGGGAGGTTGCCAGCCTTATACTAAGCTTTCCGGAAGAGAGACCTATAATTGTGCTCTCTGCAATGGGAAAGACAACTAA TTTTCTTTTATTGGCCGGAGAAAAAGCTGTAAGTTGTGGTGTTACTAACGTCGATAGTATTGGTGAGCTTAGCATTATAAAAGACCTGCATCTCAGGACT GTGGATGACCTTGGAGTGGAGAGAAGCGTTATTGGAAAGCATCTAGAAGAATTGGAACAACTTCTGAAAGGGATATCTATGATGAAGGAGTTGACTCCAC GGACTCAAGATTATTTAGTTTCATTTGGAGAGTGCATGTCCACAAGGATCTTTGCTGCATATCTTAATAAATTGGGAGTTAAGGCCCGTCAATACGATGC ATTTGAGATTGGTTTTATAACAACTGATGACTTCACAAATGCGGACATTTTGGAAGCAACATATCCTGCTGTTTCAAAGAGGTTACATGATGATTGGGTC TCTGATCCTGCAATTCCTATTGTTACAGGCTTTCTTGGAAAGGCCCGGAAATCATGTGCAGTAACAACATTGGGTAGAGGTGGCAGTGATTTGACAGCCA CAACAATAGGGAAAGCACTAGGGTTGCCCGAGATCCAGGTATGGAAGGATGTTGATGGTGTTCTGACCTGTGATCCAAATATATGCCCACAAGCAATACC TGTCCCATATTTGACATTTGATGAGGCGGCTGAACTTGCCTACTTTGGTGCTCAGGTTCTGCATCCACAGTCTATGAGACCTGCTAGAGAAGGTGATATT CCTGTTCGGGTTAAAAATTCTTACAACCCTAAAGCTCCAGGTACTCTCATCTCCAGGGAAAGAGATTTGAGCAAGGCAGTATTAACTAGCATTGTCTTGA AACGTAATGTGACCATGTTGGATATAGTAAGCACTCGCATGCTTGGTCAGTACGGTTTCCTTGCTAAGGTATTTTCAACCTTCGAAGATTTAGGCATATC AGTTGACGTTGTAGCCACAAGTGAAGTCAGTATTTCCTTGACATTGGATCCATCAAAGCTGTGGAGCAGAGAGCTAATTCAACAGGAACTTGACTTTGTT GTTGAAGAACTGGAGAAAATTGCAAAGGTGAAACTCCTACAGAACAGATCCATCATCTCTCTCATTGGAAATGTTCAGAGGTCATCGCTAATATTGGAAA AGGCATTTCATGTTCTTCATACTCTTGGGGTCACTGTTCAAATGATCTCTCAGGGTGCATCTAAGGTGAATATCTCCTTAGTTGTAAATGACAGTGAATC AGAGCAATGTGTTAGGGCTCTTCACTCGGCGTTCTTCGAGACGGAGTTCTCCGATTTAGAGAAAGAATACCTATCTGGAAATGGTTCTGTTCCTGCATTA TCTTAGGAAGAAGCTATGATTTTCTTTATTTTAGCAATATACTCTGCTATTTAATTGAGATGTGTAGCAGAACAATGTATTCTAGGGTAAGAAAAATTTT GATTTTTGATTTGGAGTGACAAGGCAGCCATATTCTGAGAAGACATTTGTATTCTTTGGTAGCCACCACACCTTCAAAGGGGGTTTATCTACAAGAAATT ACTTAATCAATTGTTATTCAATCTTATTGTGTTCGATTCATG
• Tissue: pods
• Gene name: LI_gene_177485;
• Additional information: details;

Expression of Ll_transcript_346162

FPKM

• PAB: 3.1
• PNAB: 13.2
• PS1: 7.6
• PS2: 7.1
• PS3: 5.5
• PW1: 7.9
• PW2: 6.4
• PW3: 5.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_346162

• Blastp: Aspartokinase 1, chloroplastic from Arabidopsis with 79.19% of identity
• Blastx: Aspartokinase 1, chloroplastic from Arabidopsis with 79.19% of identity
• Eggnog: Aspartokinase(COG0527)
• Kegg: Link to kegg annotations (AT5G13280)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430843.1)
• Pfam: Amino acid kinase family (PF00696.27)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;