Ll_transcript_346154

• Id Trinity: TRINITY_DN50476_c0_g4_i1
• Name Transcript: Ll_transcript_346154
• Sequence: GGTTTCTTATTTTATAATGATTGGTCACCGGCCATCCTTTTTGTCTTTGTCGGCTTGTTTTTGTTGATCATAAAGAAGAGAGAAGTAGTTAGTGGAACTG AGTTGGAAAGTTTGAAACTTTTCCATTCTATATCTATGGCTTTTTACTCATAATCTTCTTCTACAATATTACTATATACTATAACAACCTATTATTTATT CACTTCATTTTTATCTATAACAAAGTGCTATTTATATTTTCTATTTCTTTCTGTTACTTACTGCACCTCATAAGCAATAACTCCTTTTTGACATGCCTGT TTCTAATTCTATTATTACGTTTCCTTTATGATTTCAGTTTATTTTTATTAACCAAACTTGTTCTGAATACATTTTCTGTGTATTCATTGATTCATTATTA AGTCCACATCTGAATGAATCAATCAATTTCAGTGCTTTAAGAAACAAACATATTTGGTTTACTAAGAAGGCGTTGATCTAGTAGTTTAAGGCGTGACCGA TCCTGATATAGATCAGCCGGACATTCTGAAAGTGATTAGTTCATCGTGATATTGTTTGCTTCTTAATTGATTGATTGGTATCAATATCATATTGGTGGTG ATTGGTGAAAGGTTAAACTTTGATCTGTTTCAATTTTCTAGCAATGACAGTGCCTGCAAAAGTTGGAGGAGGAATCTCAATCTCATCTTCTGAGATACAT AGCCACTACAAAACTATTACCACACCCTTGGCTTCGGCTTTTCTGGAATGGTTACTCATGATTTTACTCTTTATCGATGCCGCGTTTTCTTATGTTATTA CAAAGTTTGCTTCTTTCTGCAATTTGCAAAACCCATGTTTGTTCTGCTCTAGGCTTGATCATGTGTTAGGCAAGGAGAAAAATGGTTACTATTGGGATTT GATTTGCACCACTCATAAGTCTCATATTTCTTCTCTAGTCCTTTGTCCTGCACATGATAAGCTTGTCAATGTTCAAGGATTGTGTGAAACTTGCCTTTCC TCTTTTACCAACATAGATAAATCCAACACCGAAATTTACCCGTTACTGGTGAGTCAATTAGGACACCAATCTGGCTCCAGATTTGATCAGGATCCATTAC TTGGTGCTGAACATTTGATTCCAACAACGACGACGCGCTGTTCTTGTTGTAATGAGCAAAATGTTTTAAGGGGTTTTGGTCAAAGGTTGGTATTGGCCAA GTCAAATGAGTCTGAAGGTGCTGATTCTGATGAATTAGATGTTGTTGGAAACAATTTTCATGACAACAAAAGAAGAAGAGCAAAACAATCTGTATCGTTC AAAATTGCAGATCTGAGAAATAATCAGCTCGATCCGTTATCCCATGTTGGTTACACCGAACTCAAGATTAGTTCTGATACTGAGTCTGAAGCTCCCTTAT CTGATGTGGATGATGATACAAGCATACCAGTCCGTGGAACCGATGATGCCAAGGAAGAGATAAAAGTTATACATGAACATATGGAGCCTTGCAGTTCAGC TTCCCTACTCGAGCCGTCATCAGAGCCGGGAATGCAATTAGAGAATGCAGATAGTCATGATACTAAGCCTGAAGCAGCAAAAATGGAAAGTGGGAATGGT TTGGAGGATCTTCACTGCAAGCAGGTTGAAAGAAATGATGTTTGTCCTTCCCCAAATGAGCCTATTTCCTCTAATGATGTCCCAGTTCAAGTATCAAAGG AAAACAATGATTTGACAGTTGATGAAATGAGGCTAACATCTGAGCGAAGATCCACGGATTATGAGGAAGAAATTATTAAGTCAAGCAATAAGGTGACAAC ATCTGAAGCAGGTTTAGAACCGACACCTGTTTCTACTGAAATTGGTCAGCAAAATCCCAATTCACTGGATCTTGGTGATGCTTATAAGCTAGCTGTCAGT AACCGAGGAAGACAATTATCTGGCATGCTTGTAGAACATTGGCTTGGGAAAGATTCTAGAAGAATGAGTGAAGATTTGAAGACGCTGTCTTCACAACTTT CGGCTCGAGCGATGGATCTTATCAGTCCAAGATTGTCTATAAATGGCGATGAGGTGAAGACGTGTGATGTTTCTAACTCTGCTGGAATGCAGATACTTCA GAAGATGATTTCGCTCGAACGTAATGAGTCTGGTTTGTCTCTGGATGGAAGCATCGTCAGCGAAATTGAAGGTGAAGGCACAGTTGACAGACTAAAGAGA CAAGTTGAACATGACAGGAAACTTATGAGTGCTTTGTATAAAGAGCTGGAGGAAGAAAGAAATGCCTCTGCCGTTGCTGCGAGTCAAGCATTAGCCATGA TCACTAGGCTGCAGGAAGAAAAGGCGACGTTACATATGGAAGCGTTGCAGTACTTACGAATGATGGATGAGGAGTCGGAGTATGAAACGGGAGCTTTGCA AAAATTAAACGATCTTGTTTCCGAGAAGGAGAAAGAGATAGAATACTTGGAAGCGAAGCTTGAATTTTTTAGGAAGAAATTCCACGGTGAATCAGCCCTC GAAAACATGGTAGATACAGACTCTGAAATGAGGATGAAAGATTTAGGATTGGATCATTCACAATGTACTTCCACTGAAAATGATGAAAGTATCCTCGGAA AGTCAGTTACAGAAGATCTTAAGAATGTTGAAACTGTAAAAAGTTCATCATCCGAGCTTGAAGATGAAAGGCTATATATTTCGCAACGTTTGAAGAAATT GGAGAAGCAAGTTTACTTTTTCCTGAATATTCATCAATCTGAGGATAGTTGCCTAAATTCGGATGTCGTGGATGATGACCCCTCATCCAAGAAACCTCCA GTTTGCAATGTTTTGGATATTATTGGAAGGTTAAAAGTTGTTGAGGCAGATCAGAGTTTCCTTGAGCATACTATGAAATTACTGAGAAATGGAGGAGATG GAATTAAAGCATTACAGGAAATAGCTGATCACCTGCAACAATTGCGGCGAATCGGGATACCAGAAGTAGATCAACCTGTTGCTTGAGGCTGTATATAAGG TCAGTGGTTACTGCTTTATTATGGAGTCAATGTAATGGATAGAATTTGCATAATTACCTTAGTTTTGACTAATTTGTAGAGAACATTGTGCATTATAGTA AGTGTAGCATGCAATTTACAATGTTTGGATAACTTTAATAACATCAAAGTTTGAAAGGTTAAATTTTATTGTTTTTTTGTATAACAAAGAGTATCCCTCC ACGTATGAGTAAGAAACTAATCTTTTTGGGATGCATGACTACTCCTCCTACAAGAAGTGTAGCTCCTACGAATCGAATCTTAGACCTTTTAGTCTTACAC CACTAAATCATGTATTGTTGATAATAAAAAGTGTAATTTCCAGGAATTGAATCGATAAAGACATGACAAAGTTGAGGGGTATATGTTTTTATTACTTATT GGTTGTTTATATTTTACAGATCCATAAATGAATGGTGAAAAGTGAAGAAGAATATAAAAGCATGAAGACAACAACACTGGTTGGAACTGTACAGTAACAA CACTGGATTTCATATTATAATGTTGGGAGGCTTATTTTTCTTTTTTATTTTATGGATTAACTTTGCAGCATTTGAGTTCTCTCTTTTTTCATCAAAGTTT TCTTATGCCCTTTTTGCATTGTAAAAAGACTAAACTGAATAAGTGTTTGTAATAAAGTGATGTATATTTGTTTTTGAAACATAGTGAACTAATAATTACA TTTCTTATGCATA
• Tissue: pods
• Gene name: LI_gene_177487;
• Additional information: details;

Expression of Ll_transcript_346154

FPKM

• PAB: 1.5
• PNAB: 3.7
• PS1: 5.7
• PS2: 6.7
• PS3: 9.7
• PW1: 10.3
• PW2: 10.1
• PW3: 9.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_346154

• Blastp: Myosin-binding protein 1 from Arabidopsis with 38.61% of identity
• Blastx: Myosin-binding protein 1 from Arabidopsis with 38.39% of identity
• Eggnog: Pfam:DUF593(ENOG410YFZH)
• Kegg: Link to kegg annotations (AT1G08800)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431892.1)
• Pfam: Zein-binding (PF04576.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;