| Id Trinity | TRINITY_DN50480_c0_g1_i14 |
|---|---|
| Name Transcript | Ll_transcript_345619 |
| Sequence | CCTACTAGGTGGGAGCTTCGTGCACTGGACCGCCGTTTATTTTAGAAAAAAACCTTTTAGAGGGAAGGACGCTGTCTCCCTTACTCCCTAAGAAGCTCCC CAATTCTGTTATTTAAGATTGACATTGATGACTAATGTGCATGAGATTTCGTACTTTTATGTCAATGACAACTTGAAACACCTCTTATTCAATGTTGTGG TTCTGGCATAAGATTTCATATTGGTTCTTGTTATGTATGGTTTTATATTTCTTTTTTGCAGCATCAGATAATTCTCATTACTAGCATTTTTTAAGAGCTT AATTCATATGTTGCTGATTTACAGGGTGTAAAATGTGGTATTTATGGTGCCAATTCTGCAGAGTGGATTATAAGCATGGAGGCCTGTAATGCTCATGGAC TTTACTGTGTTCCTTTATATGATACCTTAGGTGCTGGGGCAGTAGAATTTATTATATCCCATGCAGAGGTCTCAATCGTATTTGCAGAAGAAAAGAAAAT ACCTGAGTTATTGAAGACATTTCCACATGCAGCAAAGTATCTCAGGACACTTGTGAGTTTTGGAAAGGTTACTCCTGAACAAAAGCAAGAGGTTGAAAAG TATGGGTTGGCAATATATTCATGGGATGAATTTTTACTAGTGGGTCAGGATCAGAGTTTTGATCTTCCTGTGAAGAAAAGGAGCGATATCTGTACGATAA TGTATACTAGTGGAACTACTGGTGACCCCAAGGGTGTCTTAATATCCAACGAGAGTATTATTACACTCTTAGCTGGGGTTAAGCGACTGTTGGAGAGTGT CAATGAACAATTGAATGGGAATGATGTATACCTATCATATCTTCCTCTTGCACATATCTTTGATAGGGTCATTGAGGAGACATTCATATGGCATGGTGCC TCAATTGGTTTCTGGCGCGGGGATGTCAAATTGCTAATTGAAGACATTGGGGAGCTAAAACCAACTATTTTCTGTGCGGTTCCCCGTGTGCTTGATAGAG TGTACTCAGGTTTGACACAGAAGATTTCTGCTGGGGGCTTCCTTAAAAAGAAATTATTCAACTTTGCTTACTCAAGTAAGTTGAAAAACATGAAGAAAGG GCATAAGCATGCAGAGGCGTCGCCATTTTTCGACAAACTTGTGTTTGATAAGGTAAAGAAAGGCTTAGGGGGTAAGGTACGCCTTATTTTGTCAGGAGCA GCACCTCTATCTACACATGTGGAACGTTACTTACGGGTGGTGACTTGTGCTCATGTCCTACAAGGATATGGTCTGACTGAAACCTGTGCCGGAACCTTTG TCTCCCTACCAAATGAACTGGGCATGCTTGGAACAGTGGGCCCTCCTGTACCAAATGTGGCTGTCTGTCTAGAATCTGTTCCTGAAATGGGATATGATGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_177506; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_345619
| Blastp | Long chain acyl-CoA synthetase 4 from Arabidopsis with 76.83% of identity |
|---|---|
| Blastx | Long chain acyl-CoA synthetase 4 from Arabidopsis with 77.53% of identity |
| Eggnog | Amp-dependent synthetase and ligase(COG1022) |
| Kegg | Link to kegg annotations (AT4G23850) |
| CantataDB | Link to cantataDB annotations (CNT0000270) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019444628.1) |
| Pfam | AMP-binding enzyme (PF00501.27) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |