Ll_transcript_345607

• Id Trinity: TRINITY_DN50480_c0_g1_i3
• Name Transcript: Ll_transcript_345607
• Sequence: ATTTTCTCTCTTATAAAATAATCCAAAAATAAAAAGAGAAAGGTAAAATAAAAAAAGAATTAAATATTTAAATGATGGATAGCCAGTAACACGGAACGGT ATGATTGGAGAGAGTATTAATATAATTAATGTTCGGTGTTGATATTTAAAAAGGTGGGTGACCAATCCAAACCTAATCGTGGAGTCAACATAGCCAGCGT AGTAAGACACTAATACTTATTCTGTTTCTAGTCTCTCGTTTTCAAATCAAATCAAATTGTAGGTTGCGATGGCAGAGAAGAAATACATCATTGAAGTTGA GAAAGCCAAAGAAGGTAGCGATGGTAAACCTTCTATGGGACCAGTTTATCGCAGTCTCTTCGCCAAACATGGTTTCCCTTCTCCTATTCAAGGTCTCGAT TCTTGTTGGGATGTTTTTCGATTATCTGTTGAGAAATATCCAAATAATCCAATGCTTGGTCGCCGTGAAATTGTGGATGGGAAGCCTGGCAAGTACATCT GGCAGAGTTACAAAGAAGTATATGACGTGGTGGTGAAAGTTGGGAATTCTATCCGCAGCTGTGGTTATGAACAGGGTGTAAAATGCGGTATTTATGGTTC CAATTCTGCAGAGTGGATTATAAGCATGGAGGCCTGTAATGCTCATGGACTTTACTGTGTTCCTTTATATGATACCTTAGGTGCTGGGGCAGTAGAGTTT ATTATAGCCCATGCAGAGGTCTCAATTGCATTTGCAGAAGAAAAGAAGATACCCGAGTTATTGAAGACATTTCCAAATGCTGCAAAGTATCTCCGGACAC TGGTGAGTTTTGGAAAGGTTACCCCAGAACAAAAGCAAGAGGTTGAAAAGTATGGGTTGACAATATATTCATGGGATGATTTTTTACTATTGGGTCAAGA TCAGAGTTTTGATCTTCCTGTGAAGAAAAGGAGCGACATCTCTACAATAATGTATACTAGTGGAACTACCGGTGACCCCAAGGGTGTCTTAATATCGAAC GAGAGTATTATTACTCTCTTAGCTGGGATTAAACGACTGCTGGAGAGTGTCAATGAAGAATTAGAGGTGAAGGACGTATACCTATCATACCTTCCTCTTG CACATATCTTTGATAGAGTCATTGAGGAGGCATTCATATGGCATGGTGCCTCAATAGGTTTCTGGCGAGGGGATGTCAAATTGTTAATTGAAGACCTTGG AGAGCTAAAACCAACTATTTTCTGTGCGGTTCCCCGTGTGCTTGATAGAGTGTACTCAGGTTTGACACAGAAGATTTCTGGTGGGGGCTTCCTAAAACAA ACATTATTCAACTTTGCTCACTCATTGTAAGTACAGACAGTGATATTCTAGGCGACAACAGGACTCTTCACGAAATCATAAAAAACCTGTAAATTATTGG TGGTGCGTCAATAGGCATATTGCATTTTTCTAATAATATAAATTCTCAAAATTGGCCGCAGTAAGTTGAATAACATGAAGAAAGGGCATCCTCATGCCGA GGCATCTCCATTTTTTGACAAACTTGTGTTTGATAAGGTAGTAAAACTTATAGCTTTAACTCTCCAGCTCTCAGGCCTCAATATGGCAGGATTGTTCTAT TTATTTATTAATCTTGCTTTTGCAACTTGATCAGATAAAGCAAGGATTAGGGGGTAAGGTACGCCTTATTTTGTCTGGAGCAGCACCTCTATCTACACAT GTGGAATCTTACTTACGGGTGGTGACTTGTTCTCATGTCCTTCAAGGATATGGTCTGACTGAAACTTGTGCGGGAACCTTTGTCTCCCTACCAAATGAAC TGGGCATGCTTGGAACAGTGGGCCCTCCTGTACCAAATGTGGATGTCTGCCTTGAATCTGTTCCTGAAATGGGATACGATGCCCTTGGTAGCACACCAAG AGGAGAAATCTGTGTAAGGGGAAATACCTTGTTCTCAGGTTACTACAAACGTGAAGACCTCACAAAAGAGGTTCTGATTGATGGATGGTTCCATACAGGG GATATTGGAGAATGGCAACCTAATGGAAGTATGAAAATTATTGATCGGAAGAAGAATATATTTAAGCTCTCACAAGGAGAATATGTTGCTGTTGAAAATC TGGAGAACATTTATGGTCAACTTTCTCCTATTGAATCTATATGGGTTTATGGAAACAGTTTCGAGGCGTTCCTTGTTGCTGTTGCTAACCCCAGGAAGGA AGCACTTGAACATTGGGCCGAAGAAAATGGTATAAGCATGGACTTCAGTTCTCTCTGCGAAGATTCTAGAGCAAAAAAATACATACTTGATGAGCTTTCA AAGATTGCAAAGGAAAATAAGTTGAAAGGTTTTGAGGTTATAAAAGCAGTTCATCTTGACCCTGTTCCTTTTGATATGGAGCGTGACCTTACCACTCCAA CATATAAGAAGAAGAGGCCTCAATTGCTTAAATACTACCAGAATGTGATTGACAACATGTACACTAATGGAAGCAAACCGAACTAATATCATGGAGATGA ATCATTATATGCAATTCTGCATGATATTGTACTTACCTTTGTTAATTTATTTCCTTTTGGTGAGAATATCAGTATATCACTATATATGAATGTATAGAGA TAGCAAAAAATGTCATGTTTGATTTCTGCTTGACCATCTAATATATGATATGAAAATTGATTTCTGTAATTAGATATTAGGTAAACAAAGCATTGGGTTG ATATAATAAAATATTACGTGAAGAACCACGGGAAATTTACAATGATGTTGATTATGAGTTATGACAGCAACTCTGTTTCTTCTTATTTGTAGTTCTCT
• Tissue: pods
• Gene name: LI_gene_177506;
• Additional information: details;

Expression of Ll_transcript_345607

FPKM

• PAB: 1.1
• PNAB: 0
• PS1: 0.9
• PS2: 0.6
• PS3: 1.2
• PW1: 0.6
• PW2: 1.7
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_345607

• Blastp: Long chain acyl-CoA synthetase 4 from Arabidopsis with 76% of identity
• Blastx: Long chain acyl-CoA synthetase 4 from Arabidopsis with 67.3% of identity
• Eggnog: Amp-dependent synthetase and ligase(COG1022)
• Kegg: Link to kegg annotations (AT4G23850)
• CantataDB: Link to cantataDB annotations (CNT0000270)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019420966.1)
• Pfam: AMP-binding enzyme (PF00501.27)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;