Ll_transcript_346909

• Id Trinity: TRINITY_DN50484_c0_g1_i4
• Name Transcript: Ll_transcript_346909
• Sequence: GTTGCTGCAATGCTGGTCAAGGCTGTTGGACATGCATTCAGTGGAACGGGCTGAGTATTCTTTAGTCCAAAAGTTGAGAAGAGTGAAGAGGTTTATTTCA TTAGAAGAATTTTTTCATCCTGTTTCTCGTGCAATAGCTAAGGAATTATTCTCTGTATTTGGAGCAGATGCCAGGAGCCAAGAGTATATGGTTTGGGGTC CTTTGTTGTCTTTCATGTTTGAAGTTTTTGGATTGCATGAACCCCATGATTATTCAAGCTTGGATCAAGTTGTTGATATGCTGCTACGATTTAAGGGATC ACATTTGCTGTTTGAGCACATCATAAATGCCCTTTCCTGTGGTTGTAAAGTAGCCCCATTTGTTCTAACTGAATGTCCATACTCTGGGTCATATTCCCAC CTTGCATTGACATGTCACCTACTTAGACGAGAAGAACTTATGGTGCTTTGGTGGAAGTCACCATATTTTGAATTCATGTTTGAAGGTTTTCTGTCACAAA AGAATCCAAACAAAGAGGATCTGGAGTCCATGATACCAACTGTTTGGTGGCCTGGTTCATGTGAAGATGCAACTTATGAAGCTAACATGATGTTGACAAC TACAGCTCTATCTGAAACAATCAGCAAGATCGAGGAGAAGCACAGGGATCTTTGCCGCTTAGTGATACAATTTATACCACCTTCAACATCTCCCCAGTTG CCTGGGGCAGTGTTTAGGGCATTTTTACGAAACTTTCTACTGAAGAACGGAGGAGCAGACCGAGATATCCCACCCCCTGGAGTTTCTAGTAACTCAGTTT TTGTTTCAATTTACACAGTTGTACTTCATTTTTTATCTGAAGGATTTGACTTGGGTGACATCTGTGGCTGTTCAGAGAGCTGCAAAGCAGGCTTACTTCA TAGAGGTGGTCTACGAAGTTTTCCTGTAAGGTTGTTTCTGAAAAACGATTCTCTTGGAACTGATATTCCCAGGCTTGGAGGCTCCTATGCTCGTTTATCA AAGCTACACCCTATACTTCATCATGAAATGGAAGTGATTCAATGGTATGAAGGCTGCATGGATGATGTAGAAACCAGAGTTACGCATTCAACCAGGCAGA AGCCATGCTGTTGCTCTAGTTATGACTCTGATTTTGCAGGAAACTTGAAGAATCCAGTCAAATACAGGGCCAAGGGTTCTCGCAGCCATTGTAGCTCTAT TCCAGAAAGATCTGCTCATGTAACTCCTGAATGCATTGATAGGAGTTTGGAAGATGAGATAACAAATAAACCTAGCTCCAGTGATCAATCTGAACCTAGT TGTGGTCATCACCAGGTGCATCATATGAAGACTTTACCTAAGGATAGTGCTTTGTCTAAAGCTACACTACTAGAAGAAGAGCTACTTGACGTCTTACTGT GGTTGTATAAATATGGTCTTGCATCAAATTTCAAGAATGCATCATACTACATGACTCATCAGGCACAGACAATCTTGTGTTTGGAGGAAACTGATAAGCA AATAAGAGAAAGATCTTGTAGCGAGAAATTGAAGCATTTGAAAGAATCTCGGAATGAATATAGAGAGCAGGTTATTGATTGTGTCAGGCGTTGTGCTTGG TATCGTGTATCTTTATTTGCACGATGGAAGCAGAGAGGAATGTTTGCCATGTGCATGTGGGTGGTCCAGATGCTTCTAATTCTGAGCAATATGGATTCGG TGTTTATCTATGTCCCTGAATACTATTTGGAAGCTCTGGTTGATTGCTTTCATGTGTTGAGGAAAAGTGATCCACCATTTGTTCCATCCACATTTTTCAT CAAGCAAGGACTTACTTCATTTGTCACCTTTATAGCTACTCATTTCGATGATCCAAGAATATCAAGTACGGATCTCAGGGATCTTCTTCTTCAGTCTATA TCT
• Tissue: pods
• Gene name: LI_gene_177533;
• Additional information: details;

Expression of Ll_transcript_346909

FPKM

• PAB: 0
• PNAB: 2.2
• PS1: 2.6
• PS2: 0.2
• PS3: 0.8
• PW1: 1.3
• PW2: 1.5
• PW3: 1.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_346909

• Blastp: E3 ubiquitin-protein ligase RKP from Arabidopsis with 59.59% of identity
• Blastx: E3 ubiquitin-protein ligase RKP from Arabidopsis with 59.59% of identity
• Eggnog: RING finger protein 123(ENOG410XQ4V)
• Kegg: Link to kegg annotations (AT2G22010)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462466.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;