Ll_transcript_346916

Id TrinityTRINITY_DN50484_c0_g1_i8
Name TranscriptLl_transcript_346916
SequenceCAAGTAGTGAAGAAATAAAAGGACCTTATTCACCTTACACACATCATCGTGAATGAAAGGCCAACCGTCGAGTCTTACATTAATTATTAACGAAATTAGT TATCGCCGCCACCATTCAGCATCCGGTAGTTTCAATCCCCCAAATCGACACGTGTCAGTTGCATCCTCATTTCCTTGCACCTACACACTTCTTTTTTCTT CATTTTCTCCAAACTTATGGCACATCATAATATAACCATGATGATTAAAACATAGTATATACTTAATTATTCCAAACTCTCTCATTTCATATTCTATCCA CTATTTAATATTTACTGTTCATAATTATTAATTATGTAATATTTAGGTACACGTGGTATTTACTATTATATGTTATTCCTAAGTTTCAATGGTTCCTGCA AAACCCTAGCCACCTTCCTTTTGTTCATACATGAACCCCATCTATTGTTAGTGCTCAGCAATGTCAAATATTCACATTCTTTTGGATGTTCCCGACTCGG ACAAAATTATCTCCAGTGCGACGATAACTGTGTGAAAAAGAAGTTCAACATTCTTGGGAGAAATTGGACCCCGGGATAGGTAATTGTTGATGCAATGACA AAGAGCATTTTACAACTATGTGGGCTCAACTATATGGATCAAACAGTGTTATAATGTTTTATTGAATTTTGCTCGCAAAGCAATGCTTTTATGCCAGAGA TTCCTCCAAAGTTTCAAGTTTACATGGTTCATGAGTTGTTCTGAGCACAATTGATTTTGTGGTTGTTGGTCGAAGGGGATTTGAAATTGGAAAATCGTTC AGCTGGGTGCAGGTTGGTTGAAGGGGTAGTGCCTTTTGCGTCGCAGATGGGTGAAGACAGCTTTCGTGTTGGCGGGTTTTCAGCTGGTCTGGCTGTGATC TTGAAAGATGAGGAGAGAAAGGAAAATTCACGACTTCTTTCTTGTTGTGATGATTCAAGTCACCAATCTGTGGAGCGAACCCTCGAATACGTGTTTGCCC TTCCCAATAGATCACTCAATCCAGTGACTGGTTCAATTGACAGCAAATTTATTCGCTCTGTCATTAGGAATGATTTCTCTAAGTTTAATTCGAAATCCAG TGATTCATATGATCAAAGAGATGGAACTTTTGTTAGAGGTGGTTGTGGAAATAATGTTGTAGGCCTGGAAAGTTCCAGTATCCGCGGTGATATTGGAATT GTGAAGCAGCGCCCATTGCTTGTAGAGAGCATGTCAAATTTCAGTAGTGTGAGGGCCAACACTTGTGTTTGGAAAGGAAAATGGATGTATGAAGTTGTGT TAGAGACATCAGGTATACAGCAGCTCGGTTGGGCTACTCTTTATTGCCCTTTCACCGATGATAGAGGTGTTGGTGATGCTGATGATTCATATGCATACGA TGGGAGGAGAGTTAGCAAGTGGAACAAGGATTCCGAGAAGTATGGCCAGTCATGGTTTGTTGGTGATGTCATTGGATGTTGCATAGATTTAGATCGCGAT GAAATTCTATTCTTCAGGAATGGTAATTCACTTGGGGTGGCATTTCGGGGGATTCGAAAAATGGCTCCTCCTTTGGGATATTATCCAGCAATTTCTCTCT GCCACGGTGAAAGATGTCAATTGAACTTTGGGGCTCGTCCCTTTAAGTATCCAATTGACGGTTATTTTCCTCTCCAGGCTCCTCCATCTAAGAGCTATTA TGTCACCCAGTTGCTGCAATGCTGGTCAAGGCTGTTGGACATGCATTCAGTGGAACGGGCTGAGTATTCTTTAGTCCAAAAGTTGAGAAGAGTGAAGAGA TGCCAGGAGCCAAGAGTATATGGTTTGGGGTCCTTTGTTGTCTTTCATGTTTGAAGTTTTTGGATTGCATGAACCCCATGATTATTCAAGCTTGGATCAA GTTGTTGATATGCTGCTACGATTTAAGGGATCACATTTGCTGTTTGAGCACATCATAAATGCCCTTTCCTGTGGTTGTAAAGTAGCCCCATTTGTTCTAA CTGAATGTCCATACTCTGGGTCATATTCCCACCTTGCATTGACATGTCACCTACTTAGACGAGAAGAACTTATGGTGCTTTGGTGGAAGTCACCATATTT TGAATTCATGTTTGAAGGTTTTCTGTCACAAAAGAATCCAAACAAAGAGGATCTGGAGTCCATGATACCAACTGTTTGGTGGCCTGGTTCATGTGAAGAT GCAACTTATGAAGCTAACATGATGTTGACAACTACAGCTCTATCTGAAACAATCAGCAAGATCGAGGAGAAGCACAGGGATCTTTGCCGCTTAGTGATAC AATTTATACCACCTTCAACATCTCCCCAGTTGCCTGGGGCAGTGTTTAGGGCATTTTTACGAAACTTTCTACTGAAGAACGGAGGAGCAGACCGAGATAT CCCACCCCCTGGAGTTTCTAGTAACTCAGTTTTTGTTTCAATTTACACAGTTGTACTTCATTTTTTATCTGAAGGATTTGACTTGGGTGACATCTGTGGC TGTTCAGAGAGCTGCAAAGCAGGCTTACTTCATAGAGGTGGTCTACGAAGTTTTCCTGTAAGGTTGTTTCTGAAAAACGATTCTCTTGGAACTGATATTC CCAGGCTTGGAGGCTCCTATGCTCGTTTATCAAAGCTACACCCTATACTTCATCATGAAATGGAAGTGATTCAATGGTATGAAGGCTGCATGGATGATGT AGAAACCAGAGTTACGCATTCAACCAGGCAGAAGCCATGCTGTTGCTCTAGTTATGACTCTGATTTTGCAGGAAACTTGAAGAATCCAGTCAAATACAGG GCCAAGGGTTCTCGCAGCCATTGTAGCTCTATTCCAGAAAGATCTGCTCATGTAACTCCTGAATGCATTGATAGGAGTTTGGAAGATGAGATAACAAATA AACCTAGCTCCAGTGATCAATCTGAACCTAGTTGTGGTCATCACCAGGTGCATCATATGAAGACTTTACCTAAGGATAGTGCTTTGTCTAAAGCTACACT ACTAGAAGAAGAGCTACTTGACGTCTTACTGTGGTTGTATAAATATGGTCTTGCATCAAATTTCAAGAATGCATCATACTACATGACTCATCAGGCACAG ACAATCTTGTGTTTGGAGGAAACTGATAAGCAAATAAGAGAAAGATCTTGTAGCGAGAAATTGAAGCATTTGAAAGAATCTCGGAATGAATATAGAGAGC AGGTTATTGATTGTGTCAGGCGTTGTGCTTGGTATCGTGTATCTTTATTTGCACGATGGAAGCAGAGAGGAATGTTTGCCATGTGCATGTGGGTGGTCCA GATGCTTCTAATTCTGAGCAATATGGATTCGGTGTTTATCTATGTCCCTGAATACTATTTGGAAGCTCTGGTTGATTGCTTTCATGTGTTGAGGAAAAGT GATCCACCATTTGTTCCATCCACATTTTTCATCAAGCAAGGACTTACTTCATTTGTCACCTTTATAGCTACTCATTTCGATGATCCAAGAATATCAAGTA CGGATCTCAGGGATCTTCTTCTTCAGTCTATATCTACCCTGGTTCAGTACAGGGAGTATTTGGTTGCTTTTGAAAGCAATGTTGCAGCCACTCGAAGGAT GCCAAAAGCATTATTATCAGCATTTGATACCAGATCTTGGATCTCAGTGACAAACATACTTGTGCAATTCTGCAAGGGTTCTGGTTTTTCGAAGAATGGA GAATCATCTTCCTCATCAGTTATTTTCCAAAGGTTGCTAAAAGAAGTATGTATGAACAACGAGGGATTGTTTTCAGATTTTCTAAACCGTTTATTTAATA CACTTAGCTGGACAATGACTGAGTTTTCGGTTTCCATTCGAGAAATGCAAGAAAAATACCAGGCAGTAGAGCTTCAGCAAAGGAAGCGATGTGTTGCATT TGATCTTTCATGTAATCTTACAAGGATTCTAGAGTTCTGTACCCGTGAGATTCCTCAAGCATTCATGTCAGGACCAGACACAAACCTGCGAAGGTTAACT GAATTGATCGTCTTTATCTTAAATCAAATTACTTCAGCAGCCGATGCTCAATTTTTTGACTTATCACTTGGACGGCACGATCAATCTTCAGAGAAAGTAA ACAGAGGCATGATATTGTCACCGCTTGTAGGGATGATCTTAAATTTATTGGATGCTACTAATTTGGCTGAATGCCGAGAGAACAATTATGTTGTGGATGT TTTTGCAAGCATGGACTGTCCAAATACTGTTCATTATGGATTCCAGTATCTTCTGGATTATAACTGGGACGGGTCTTTTAAGGGGGAGGCTTATTTGGCA AAGTATGAGCAGCTAGAGAAATTTCTGACCCTCCTTACTTGCCGCACAATGGCGCAATATGATAAAGTGGAAGGTGTGGGAGACAAGGATATTGATGATA GCTTGTGCTGCATATGTTGTACATACAAAGTGGATGCTCTGATTGCACCTTGTTTACATAGATCTTGCTATGGCTGCATAACCAGACATCTTTTGAACTG TCAGAGATGTTTCTTTTGCAACATAGCAGTTACAGGTGTAAGCAAAATTGATGAGAAGATGGGCTAAGACACACTTTTATGTGGCTGCTTGGTCCCTGGT GGAACTTGAGCCAGAGTGTACCAAACTGAGTCCTTGATCTAAAAAATTACCCGGGAAGTGGAACACCGTCATCATGTCATCTTTCGACTCTTTCAGAATG GTAGAACAGGATATTAGTATGGAATGCAGATGAAAGTGCAAATATATTATAGGCTAGAACAACACCAAAGTGAAACATAGATGAGAAGCTCAGCTGGATT TTGTCATCCATTTAGTAAAATTATCGCTCTGGATTGTGTTAGTAGTTCATCGTCTATTCAATGTTTGTAATTTGTTTATAGAAAAGAAATTATAAGAACA TGTAGTCTAAACCGAGCAAATGATTAGATGCATGGGGGTTTAAACCAGGAAATAAATTTTGTATGGAAAGCTTGTATCAGTTATATGATTTGGATGCTAA AAATGATACAGTCAAATTGTAAAAGGTAATCCCACCATCCATCTTTTCTCTATACTCCTTCAACAACGTTTAAAGATGAATAATCGAACAAGCCC BLAST
Tissuepods
Gene nameLI_gene_177533; 
Additional informationdetails; 

Expression of Ll_transcript_346916

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_346916
BlastpE3 ubiquitin-protein ligase RKP from Arabidopsis with 62.32% of identity
BlastxE3 ubiquitin-protein ligase RKP from Arabidopsis with 61.58% of identity
EggnogRING finger protein 123(ENOG410XQ4V)
KeggLink to kegg annotations (AT2G22010)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019462466.1)
PfamUbiquitin elongating factor core (PF10408.8)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;