Ll_transcript_346918

Id TrinityTRINITY_DN50484_c0_g1_i9
Name TranscriptLl_transcript_346918
SequenceGTTGCTGCAATGCTGGTCAAGGCTGTTGGACATGCATTCAGTGGAACGGGCTGAGTATTCTTTAGTCCAAAAGTTGAGAAGAGTGAAGAGGTTTATTTCA TTAGAAGAATTTTTTCATCCTGTTTCTCGTGCAATAGCTAAGGAATTATTCTCTGTATTTGGAGCAGATGCCAGGAGCCAAGAGTATATGGTTTGGGGTC CTTTGTTGTCTTTCATGTTTGAAGTTTTTGGATTGCATGAACCCCATGATTATTCAAGCTTGGATCAAGTTGTTGATATGCTGCTACGATTTAAGGGATC ACATTTGCTGTTTGAGCACATCATAAATGCCCTTTCCTGTGGTTGTAAAGTAGCCCCATTTGTTCTAACTGAATGTCCATACTCTGGGTCATATTCCCAC CTTGCATTGACATGTCACCTACTTAGACGAGAAGAACTTATGGTGCTTTGGTGGAAGTCACCATATTTTGAATTCATGTTTGAAGGTTTTCTGTCACAAA AGAATCCAAACAAAGAGGATCTGGAGTCCATGATACCAACTGTTTGGTGGCCTGGTTCATGTGAAGATGCAACTTATGAAGCTAACATGATGTTGACAAC TACAGCTCTATCTGAAACAATCAGCAAGATCGAGGAGAAGCACAGGGATCTTTGCCGCTTAGTGATACAATTTATACCACCTTCAACATCTCCCCAGTTG CCTGGGGCAGTGTTTAGGGCATTTTTACGAAACTTTCTACTGAAGAACGGAGGAGCAGACCGAGATATCCCACCCCCTGGAGTTTCTAGTAACTCAGTTT TTGTTTCAATTTACACAGTTGTACTTCATTTTTTATCTGAAGGATTTGACTTGGGTGACATCTGTGGCTGTTCAGAGAGCTGCAAAGCAGGCTTACTTCA TAGAGGTGGTCTACGAAGTTTTCCTGTAAGGTTGTTTCTGAAAAACGATTCTCTTGGAACTGATATTCCCAGGCTTGGAGGCTCCTATGCTCGTTTATCA AAGCTACACCCTATACTTCATCATGAAATGGAAGTGATTCAATGGTATGAAGGCTGCATGGATGATGTAGAAACCAGAGTTACGCATTCAACCAGGCAGA AGCCATGCTGTTGCTCTAGTTATGACTCTGATTTTGCAGGAAACTTGAAGAATCCAGTCAAATACAGGGCCAAGGGTTCTCGCAGCCATTGTAGCTCTAT TCCAGAAAGATCTGCTCATGTAACTCCTGAATGCATTGATAGGAGTTTGGAAGATGAGATAACAAATAAACCTAGCTCCAGTGATCAATCTGAACCTAGT TGTGGTCATCACCAGGTGCATCATATGAAGACTTTACCTAAGGATAGTGCTTTGTCTAAAGCTACACTACTAGAAGAAGAGCTACTTGACGTCTTACTGT GGTTGTATAAATATGGTCTTGCATCAAATTTCAAGAATGCATCATACTACATGACTCATCAGGCACAGACAATCTTGTGTTTGGAGGAAACTGATAAGCA AATAAGAGAAAGATCTTGTAGCGAGAAATTGAAGCATTTGAAAGAATCTCGGAATGAATATAGAGAGCAGGTTATTGATTGTGTCAGGCGTTGTGCTTGG TATCGTGTATCTTTATTTGCACGATGGAAGCAGAGAGGAATGTTTGCCATGTGCATGTGGGTGGTCCAGATGCTTCTAATTCTGAGCAATATGGATTCGG TGTTTATCTATGTCCCTGAATACTATTTGGAAGCTCTGGTAAATAAGAAATTGTAACTGGTTTAAATTTTAACAGTTGTCTTTTACTCACTTAGCTGCAG GAAAAAAATAAGTGTTCAATAGTTTTCTGGTTACCCCCTTCCTTTTATTGGGGTTTACTTTGCTCATCTTTTGACATATTAGACCATGTCCTTGATGCAT TGTGCTGCCCTGCTGATAGGAGAGAGTTGTAGTAGGAAAAAATAAAATTTGATATTGGCTTGGGAGTTATGCATATCCGACCGGCCTCAGTTAATCTGTC TTCAGCCTTCACATAATACTTATTTACCCATTAAGTTTTATTTTAGAGTTAATATTTCTCTTTCACACAGGTTGATTGCTTTCATGTGTTGAGGAAAAGT GATCCACCATTTGTTCCATCCACATTTTTCATCAAGCAAGGACTTACTTCATTTGTATGTGTCATATTTCAACCTTTATTTCTCCACTTCTCTTTCATTT TGCTAAAGGTAATTCTATTGATGCATAAACGTCTACTTGGATATCTGGTAATACATTTTGGGTAAATGGATTTTCGAGGCCATATTCATATGATATCAGC CTCTAAGAAACAATTTGATACTTAAAGTTTTGGGTGTTAGAGTTTAGATAAGTATTTGGTGTCTTGTACTGTCTCCTAACGTAGTCATCTCCAAATATTG TTTGGTCTCGATCAATACAGGATGGGAAATACTAATTTTTATTCACTCCAGGTAATAATAGACTCATCATTTCATTGGTTTCCAATTCCGTTACTTGATA GATTTGGGAAAGTTTTAATACAATGTTGGATGTCATTCACATCTGGTCAATGACTTACTGGGGTGATCTTATGGCTCCCTTTGGAAGGGTTAATAATGCC ATGCAAAATAATATGGTAGGCGTTGGCACTAAAAATAGATACAATTAATAGAAGGTTAGAAGTGACTTTTAATTTCAATACTCGATATTGAACACACTAA TGATTTATTGATTGTGCAATATCTTTCTCTACTGTTTATAAAGACAGCAAAGTGGCAGTTTCCGTCATTTCTCTCTGCACAAAAAGTTAAAAAATATCCT TATGCAGTTTGTTAATTGAAGTATTGAACTCATATAAGAGTATAGTGTTATAAATGCAAACATGCTTAAAACATTTTCTTATGCTTAAAACTAATAACCT GGAACTCAATTTCCTATGCACATCCCTTGTTTTTCTCAGTTTCTTTAATCCAATCTGCATTGCATTTTAACTTGATTGCAAACATGCATGTGCAATTTTC TAGCGTTTATAGGATACAAATTGTAGATGAACATTTTACTCCTCATGGATTAATTGGATTCTATCCTCTCTAATAACAAAGAACTAGGATTATTGTAGAG CTGACTAGTTATGCAGACTGGCGATCATGACATACTGATATCTATTGTCATGCATACAGCCAGATTGCGAATCAAACTTTCATCTATGGTATTTCTACCA TGGCTTCTGAAGTATGCTTGGTTGTCCTTTTAATTAGGTCACCTTTATAGCTACTCATTTCGATGATCCAAGAATATCAAGTACGGATCTCAGGGATCTT CTTCTTCAGTCTATATCT BLAST
Tissuepods
Gene nameLI_gene_177533; 
Additional informationdetails; 

Expression of Ll_transcript_346918

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_346918
BlastpE3 ubiquitin-protein ligase RKP from Arabidopsis with 57.29% of identity
BlastxE3 ubiquitin-protein ligase RKP from Arabidopsis with 57.24% of identity
EggnogRING finger protein 123(ENOG410XQ4V)
KeggLink to kegg annotations (AT2G22010)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019462458.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;