Ll_transcript_346912

• Id Trinity: TRINITY_DN50484_c0_g2_i3
• Name Transcript: Ll_transcript_346912
• Sequence: GAATTTATTGACTTGTAAGTCCCAAGCCTTTGACTTAAACTCCACTTCGAAGGCCAGAAAGTGACTTTTTTCTTGAATTTTGTTTATGCATTTGCTCTAT ATATGGATTACTTCCTGAGAACCCAACAGTCCAATCTTAATATGACCTAACTTGACCTGCAACAGAAATTCATTGAGAATTTGGAACCATTTGAGTTAGT GGAAAATAGTTTTCATTAATTTATTTTTGATGAATGCCATCCTTTTATCATTCGTTTTCAGGTCTCTTAGACAGCATAGCCAATCTTCAGAGAAAGTAAA TCGAGGCATGATATTGGCACCTCTCACAGGGATCATCATAAATTTATTGGATGCTACTCATCTGGAAGAATATCGAGAGAAGAATGATCTTTTGGATGTT TTTATGACCATGGACTGTCCAGATACTGTCCATTATGGATTCCAGAATCTTCTGGATTATATCTGTGTTAGTTGTTATCACCCTTAATCTATTTTCTTTG TTCTTAAATATTTTGGGTGCCTTTGTTTTTATTGTTCTCTTTATCAATCTTTGTGAAATTCCAATTAATTCACTTCATTATTTTGGTTACTGGGTGGTGA GTTGGTGATGAATAATGCTCAAGGAATGTTTTTGACACTTGCATGCTTTCTACGTATGAAAAAGCAGCTTGGTTTTCCCTAACATACACAGAAAGTAGCT TCAATGTCACTCTTTTCATAAGATATTACTGAGAATAGGAAGATATACTCTGTATGAATCTTATTAATCTTCCATTGGTACAAATCTTTCAGAGTTTTGA CACCTGCATTGCAAAATTAAAAGTTGATATATTCTTCCTACTACTTCAATAGACAATAATTAAACTTCCAATGGAAATGAGCCCCTGTTGAAAAATGAGT GGCTTTGCATTATACATGTCATGATCCCAGTTTTCCCCTGATCTTTTGAAGAATTGATATTAATTTGTTGAAATGAGGTTTTCTAACACTACTCAAGTTC ACCATCTTTTTGGTCTTCATTTTCCCAGGATGGATCTTTTCACGGGCAAGCTTTAGCAGCAAAATATGAGCAGCTAGAGAACTTTCACAGCCTCCTTACT TTCCGTGCCACGATCCAACACAATAAAGTGGATGACGCGGCAGATACCATTCCTGATGATAGCTTGTGCTGCATATGTTACACATGCGAAGCAGATGCCC AGATTGCACCTTGTTCACATAAGTCTTGTTACGGCTGTATAACCAGACATCTTCTGAACTGCCAGAGATGTTTCTTTTGCAATGCAACAGTGACAGATGT TCGCCGAATTGTTGAGAAGACAGGCTAAGGAGCTTCTATTTTTTGGTTCCTTGGCCCATGGTGGAAGAGAGTGATTATTTATTTTGCTTACCAACATAAT ATTTGTTAGATTACAAGAAGTGAAGAGTGAAGGAAACAAAAAAGAAAGATGTGGACTAGGGGGAAAATAGTGTAGGGGTAGTTTGACAGGAGTTGATATT GGTGGAGATGGTGAAGTACTTAATATTGGGAAGTCATCAATTTTGTAGGCTATGTTAGAGAGTTATTATACTGTACATATGCATGTAAATGGCAAGGAAA ATCTTCAAGACTTTGTCTCAGTTTGACAACTCTTCATTATTCACAGGATTGACTTTGAAGGGTCAAAGGCTTGATATTGCAACAGTTACTAACTAGCATG GTTGAAGTAGGTGTTGGCTGTTTGGCACAACAATGACTTAGAGAATATTGAACATTCATAACAGTATTTAGTTGATTGTTCAGAAATGCACTACGCAAAG TTGTCATTGTGCTCAACAGCTAATATCTGCAATTTTGATCCTACTTGTTGGTGAATGGTGATTATTCATTC
• Tissue: pods
• Gene name: LI_gene_177534;
• Additional information: -

Expression of Ll_transcript_346912

FPKM

• PAB: 1.8
• PNAB: 0.4
• PS1: 0.3
• PS2: 0.2
• PS3: 0
• PW1: 0.4
• PW2: 0.3
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_346912

• Blastp: -
• Blastx: E3 ubiquitin-protein ligase RKP from Arabidopsis with 60% of identity
• Eggnog: RING finger protein 123(ENOG410XQ4V)
• Kegg: Link to kegg annotations (AT2G22010)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415400.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;