Ll_transcript_346920

Id TrinityTRINITY_DN50484_c0_g2_i6
Name TranscriptLl_transcript_346920
SequenceCTAAAATATAATTTATCTCCTTACTTATATTATGAGATATTTTATTCTCAAATTAAAATTATTATAAATATTATAAAAACAGAGAACCAACAAAACAAAG AGTTCAATACGACACTACCTTTCTAATTTCATTTTCTCTTTGATTTCTCTTCTTAAATTACCGTTACAGTGTTACTGTTACGACGGAATCACAAGCGTTG GCGACTTCAAAACCCTAGCAATCTTCCACCGCTTTTTATTCGCTCACACTTTGAACCTATTTTCATGGTTCACAAATATCTTGCGAGCGCAATTGACTTT GCTGTCAAAGGGAATTTGAAATTGGAAAAGCTAGCTTTCAGCTGGCTTTTGTGCTAGTTGAGGAATAGTGCCTTCTGTCTATATCAGATGGCTGAAGACA GCCTGTGCGGTGGTGGGTTTTCAGCTGGTCTGGCGTTGATATTGGATAGCAATGATAGTAAAAAGAATTTGTCGAAAGCTAGACTTCTTTCTTCTTGTGA TGATATGGGTCAACAATCCATGGAGAGAACCCTTGAATATGTTTTTGGCCTCCCCAACAGGTCGCTCAATCCATTGAGTGGTCCAATCGACCACAACTTA ATTCACACTGTCATAAGGAATGATTTCTCGAGATATAATGTGAAATTTGGTGATTCATTTAATGAAAGAGATGAAATTGGTGTTGGTAAAAAAGGCAGTG GGTCTGATGTTGTAGGCTTAGACAAATGCAGTATCTGTGGTGATATTAAAATCATCAAGTCACCATTTTTTATAGAGAGCTTGGCAATGTTCAGTAGTGC CAGGGCTAATGCTTGTGTTTGGCAAGGAAAATGGATGTATGAAGTTATGTTAGAAACATCTGGTATACAGCAGCTTGGTTGGGCCACTATTTCTTGCCCT TTCACTGACCATAAAGGTGTTGGTGATACTGATGATTCATATGCATATGATGGGAGAAGAGTTAGCAAGTGGAACAAGGACGCAGAGCCCTATGGTCAGT CATGGGTTGCTGGAGATGTTATCGGATGTTGCATAGATTTAGATCGCAATGAAATACTATTTTACAGGAATGGGAATTCACTTGGGGTGGCATTTCGTGG AATTCAAAAAATGGGTCCTGGTTTTGGTTATTATCCTGCAATTTCTCTCTCCCAGGGTGAAAAATGTGATTTGAACTTTGGGGCCAGACCCTTTAAGTAT CCCATTGAAGGCTACCTTCCTCTTCAGGCACCTCCCTCTAAAAGCTACTTTGTCACCCGGTTGCTGCAATGCTGGTCAAGGCTGTTGGACATGCATTCAG TGGGACGGGCCGAACATTCTTTAGTTCAGAAATTGAGAAGAGTGAGGAGGTTTGATTCATTAGAAGAAATTTTCCATCCCGCCTCCTATGCAATATGTGA GGAATTATTCTCTATTCTGGAAGCAGATGTTGGGAACATAGAGTATATGGTTTGGGGTCCATTTTTATCTTTCATGTTTGAAGTTTTTGAATTGCATGCA CCCCATGATTATTCAAGCTTGGATAAAATGGTTGGAGCACTGCTACAATTTCAAGGATCACACATGCTATTTGAACACATCATAAATGCTCTTTCCTGTG GTTGCAAAACAGCCTCATTAGTTCTATCTGAATGTCCTTACTCAGGATCATATTCTCATCTTTCGTTGGCATGTCATCTATTAAGACGAGAGGAACTTAT GGTGCTTTGGTGGAAGTCACCAGATTTTGAATTCTTGTTTGAAGGTTTTCTATCACAAAAGACTCCGAACAAGCAGGATCTTGACTCCATGATACCAACT GTTTGGTGGCCTGGTTCATTTGAAGATGTGTCCTGTGAAGGTAACATGATATTGACAACCACGGCTTTGTCTGAATCAATCAGCAAGATTGAGGAGAAGC ATAGGGCCCTTTGCCGTTTGGTGATACAATTTATACCACCGACAGCACCTCCCCAGTTACCCGGAGCAGTGTTCCGAACATTTTTACAAAGCCTTCTGCT GAAGAACAGAGGAGCAGAACGAAATGTCCCACCTCCTGGAGTTTCTAGCAATTCGGTTCTTGTTTCAATTTATTCAGTTGTACTCCATTTTCTATCTGAA GGATTTGCCTTGGGTGATATCTGTGGCTGGTTAAATAGCTGCAAAGCGGATGTTGGTTTCCTTCACAGAGGTGGTCAACAAGGTTTTCCTGTACAATTGT TTCTAAAAAATGATCCCCATAGAACTGATAATTCCAGGCTTGGAGGATCGTATACCCATTTATTAAAGCTACACCCTGCAATTGATCATGAAATGGAAGT GGTTCTATGGGATGAAGGTTGCATGGATAGTGAAGAAACCAGAGTAACTCATTCTACCAGGCAGAAGCCATGCTGTTGTTCTAGCTATGACTCTGGTTTC ACAAGAAACTTGAAGATTCCAGCTAAATTTATGGCCAAAGGTTCCAAGGGTCATTGTAGCTCTATTCCAGAAAGACCTGCTCATGTTGCTTCCGAATGCA GTGATGAGAATTTGAATGATGAGATAACAGATAAACCTAGCTCCGGCAATCAATCTGAACCTGAGTATGGTTACCGCCACATGCACCATATGAAATCTAT ACCGAAGGATACTAATATAATTATAGCTATGCTGCAAGAAGAAGAACTACTCGATGCTTTGCTGTGGTTGTATCATGTTGGTCTTGCTCCGAATTTTAAG CAGGCATCATACTACATGAATCATCAGGCACAGTCAATATCCCTCTTGGAGGAAACTGATAAGCAAATAAGAGAAGGGGATTACAGCGAGAAATTGAAGC ATTTGAAAGAAACTCGTAGTGAACGTAGAGAAGAGGTTATTGATTGTGTCAGGCACTGTGCTTGGTAAGATGATCATATAAAGGAGTACCTGAGTTAATT TGTCTTATTTGTTTATTGTTTCCCTCATTTAGGTATTTTTGCTTTTCATCTACCTTATACCTTCTCCCATACAGTATTAGATTGGCGTTTTACAGAAGTA GCTAGTGGTTAGTAATAGATGTGGTTTTAGTTCTCGACTTCTCACTATCTCGAGTTAACCAAATTTGACTCAGCATGTGGCTGTTTAAGTACC BLAST
Tissuepods
Gene nameLI_gene_177534; 
Additional informationdetails; 

Expression of Ll_transcript_346920

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_346920
BlastpE3 ubiquitin-protein ligase RKP from Arabidopsis with 61.4% of identity
BlastxE3 ubiquitin-protein ligase RKP from Arabidopsis with 61.4% of identity
EggnogRING finger protein 123(ENOG410XQ4V)
KeggLink to kegg annotations (AT2G22010)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019415400.1)
PfamSPRY domain (PF00622.27)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;