Ll_transcript_346921

• Id Trinity: TRINITY_DN50484_c0_g2_i7
• Name Transcript: Ll_transcript_346921
• Sequence: TGGAAGCTCTGGTTGATTGCTTTCATGTGTTGCGGAAAAGTGATCCTCCATTTGTTTCATCTACAGTTCTCATCAAGCGGGGTCTTGCTTCATTTCATGC TTGTTGCTTCTCACCCTTGCTCTGCTTTACTAAAGGTGTTGAGTGTTTCTACCACCGGTTCTAAATCATGCGTGTATATGTTTTTCACTAGGTTACCTTT GTTGTTACCCATTTCAACGATCCAAGAATATCAAGAGCAGATCTTAGGGATCTTCTTCTTCAGTCTATATCTGTCCTGGTGCAATACAGGGAGTATTTGG AAGCTTTTGAGAGGAATGAGGCAGCTACCCAGAGGATGCCAAAAGCTTTACTATCAGCATTTGATAACAGATCTTGGATCACAGTAACAAACATAATCTT GCGATTATGCAAGGGATCTGGTTTTAGTTTTTCAAAGAATGGAGAATCATCTTCATCATCAGTTCTTTTCCATCGGTTGCTTAAAGAAGCTTGCATAAAT GATAAAGGGTTATTTTCATCTTTTCTGAATCGTGTATTCAATACACTTAGCTGGACCATGACTGAATTTTCAGTTTATGTTCGAGAGATGCAAGAAAAGT ACCAGGTAATGGAGTTTCAGCAAAGGAAATGCTCTGTCATATTTGATCTTTCATGTAATCTTGCAAGGATTCTAGAGTTCTGCACTCATGAGATTCCCCA AGCATTCTTGTCTGGATCCGACACAAACCTACGGAGGCTGACTGAGTTGATTGTATTTATATTAAATCACATTACTTCTGCAGCCAGTGCTGAATTTATT GACTTGTCTCTTAGACAGCATAGCCAATCTTCAGAGAAAGTAAATCGAGGCATGATATTGGCACCTCTCACAGGGATCATCATAAATTTATTGGATGCTA CTCATCTGGAAGAATATCGAGAGAAGAATGATCTTTTGGATGTTTTTATGACCATGGACTGTCCAGATACTGTCCATTATGGATTCCAGAATCTTCTGGA TTATATCTGTGATGGATCTTTTCACGGGCAAGCTTTAGCAGCAAAATATGAGCAGCTAGAGAACTTTCACAGCCTCCTTACTTTCCGTGCCACGATCCAA CACAATAAAGTGGATGACGCGGCAGATACCATTCCTGATGATAGCTTGTGCTGCATATGTTACACATGCGAAGCAGATGCCCAGATTGCACCTTGTTCAC ATAAGTCTTGTTACGGCTGTATAACCAGACATCTTCTGAACTGCCAGAGATGTTTCTTTTGCAATGCAACAGTGACAGATGTTCGCCGAATTGTTGAGAA GACAGGCTAAGGAGCTTCTATTTTTTGGTTCCTTGGCCCATGGTGGAAGAGAGTGATTATTTATTTTGCTTACCAACATAATATTTGTTAGATTACAAGA AGTGAAGAGTGAAGGAAACAAAAAAGAAAGATGTGGACTAGGGGGAAAATAGTGTAGGGGTAGTTTGACAGGAGTTGATATTGGTGGAGATGGTGAAGTA CTTAATATTGGGAAGTCATCAATTTTGTAGGCTATGTTAGAGAGTTATTATACTGTACATATGCATGTAAATGGCAAGGAAAATCTTCAAGACTTTGTCT CAGTTTGACAACTCTTCATTATTCACAGGATTGACTTTGAAGGTTGTATCTTCTCCAACCATGTAATGTAGAACAAAATAGTTAAATGCATGGGGGTTTA ATTTTTTATAAGACTAGCAAAAAATTCACCTTTCCTCCCCTGCTTAGATATTTAAATTACATAGTTTTTTCTTAGTAAAATTATATTCAACTAATTTGAG AGATGAAAATGTGTTATACTTTATATAACTTACCTTTAAAATTGTCACAGGGTCAAAGGCTTGATATTGCAACAGTTACTAACTAGCATGGTTGAAGTAG GTGTTGGCTGTTTGGCACAACAATGACTTAGAGAATATTGAACATTCATAACAGTATTTAGTTGATTGTTCAGAAATGCACTACGCAAAGTTGTCATTGT GCTCAACAGCTAATATCTGCAATTTTGATCCTACTTGTTGGTGAATGGTGATTATTCATTCCCACTTTCCTTCTCAAAATTTTATTTCTTAGGAGTGGAG AATATAATTTCTCAAAATAAAGAGAAGATCAATGTAATTTAAGTGTATGTTTGGCACTGATTGACTATTGTAATTTAAGCTCTTTTTTTAATATAAAAAA AACAAAGTAGCGTGTGAAATGACATTACTATTTTTTATAAATTTCAGTAGGAATTTGAC
• Tissue: pods
• Gene name: LI_gene_177534;
• Additional information: details;

Expression of Ll_transcript_346921

FPKM

• PAB: 4.1
• PNAB: 0.2
• PS1: 0
• PS2: 0.5
• PS3: 1
• PW1: 0.7
• PW2: 0.3
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_346921

• Blastp: E3 ubiquitin-protein ligase RKP from Arabidopsis with 67.18% of identity
• Blastx: E3 ubiquitin-protein ligase RKP from Arabidopsis with 63.82% of identity
• Eggnog: RING finger protein 123(ENOG410XQ4V)
• Kegg: Link to kegg annotations (AT2G22010)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415400.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;