Id Trinity | TRINITY_DN50487_c0_g1_i11 |
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Name Transcript | Ll_transcript_346211 |
Sequence | GAGGACCACTCGAGCAGTAGCATTATGCAAGTTGTGGTTGTGGTGGATATCTAGCTGATATGTTCACACGTTCAATTTCTGTCCTTTTCTACTTGCTCCT TATAAGGATCTTCTTTCAAATCAACATTCATTTAATCCCATATTTTTGTTGTGTTACTTTCAATCTGGGATACCCTCTTATTAAAATATGATTAATTGCT AAATAGCGCTGAATAAATGCTGAGATAGTGATTCGGTGATTCCATATTTAAGGAGTTGTGCTTTCAAAGTGTAGTGTAGCACAATACACAAGTCTTTTTT GGGTTCTGTTTTAGTCTTTTAAATTGAGGCAATGAAGGCAAGGAAAGGAAAACGCTCAGAGGGCTTTTGGCCTTCTCTTGTGATGAAAAAATGGTTAAAT GTGAAGCCTAAGGTGAATGATTTTAGTGAAGATGAAGTAGACACTGAAACTGAGAGTGAAGATGATGCTTCCTCTCCTAAATATTCAAGAATGCGCGAGT GTGAAGATAATCCACTTAAAACACAAGGAACCCAATCCATATTCTCAAGTCAAACATCAGATGCATCTTGTAAGGGTTACAAGATAAGTCACAGAAGAGG AAAATCAGAAACTCTGCGTGCTCAGTACATAAATACAAAGGAAGTGAGAGTAGCAATTGGCACTTGGAATGTTGCTGGAAAACATCCACATGAGGATCTT GAGATTGATGACTGGATTTGTGCTGAAGACCAAGCAGATATTTACATTCTTGGTTTCCAAGAGGTAGTTCCACTGAGTGCTGGAAATGTACTGGGAGCAG AGGATAATACACCGATTCATAAATGGGAGGCAATCATTCGAAGAATTTTAAACAAATCTTCTGAATCGGAAAGTGACAGTAAACACAAAAGCTATAGTGC CCCTCCTTCTCCAGTTTTAAGAACTTCATCTGCTGCTGATGTTCTGGCAGATAACTTAGATGCTAATGCAATAGATATAATGAATGAGGAGTATGTGGAA ATCGTTGACAATGACTTGTTGGAGCAGCAGGAATTGAAAAACATTAATTGTATAGGGAAGAATTTACAGTTGAATAGAATATATAACATGGATATTCAGC CTAGACTCGACTGGCCTGAACGTCCATTAGATGCAATCTCCCAAATTGTTGATTCCAATCCGAAGTTACGCAGAGTACTTAGTGGCTCAGATAGAATTGG ATTTAGCTGGAAGGACAACGCTTTAATACATGGCAGCGGATTGAAACGTTCACACCACAGTTCTGGAAACTTGGGTTTGTTATGTAAAGAGCAGCAAGTG ATTCCTAAAGAAGTAGTCGATTCCTTAGTAGCTGAAGTATCTGACATGCTATCAACTGAGAATGATGTTACTTTTAATGAATTACCTAATGCCCAAGATG ATTATGGATTAGACGCAATGAAATCGAGTCCAAGGTATATCCGAATTGTCAGTAAGCAGATGGTAGGGATATATGTATCTGTTTGGGTGCAGAGAAGGTT GAGAAGGCACATCAATAATTTGAAAGTTTCTCCAGTTGGAATTGGTCTTATGGGATATATGGGAAATAAGGTAAGTCTTATTTTCACACACTATGTCACA GACCGTCAACATAGCATAGACATATACTCAATGTATTCCAATATAAATTAGTACTATAGATGTAATACAAAGTCTATCATGCAATTATAATCTGATACGC ATCATTAATATGTTTCTGATTCATAAAGTGATAACTGGATGACTGTGTGAATTGTTACATTAGATGTAATCATGTAGAACATAAGGAATCTCACCATATA GCTAGACCTTTCTTATTTTGACATGAGTGGATGTGATGATAACAAATTGTGACTGATGCAGGGGTCAGTTTCGATTAGTTTGTCTCTCTTTCAATCGCGT CTTTGCTTTGTTTGTTCCCATCTTTCTTCTGGTCAGAAAGATGGACAGAGGCGAAACTCTGATGTTCATGAAATTCTCCGACGCACTTGCTTCTCATCCG TCTTTGATCCAGATCAGCCACAAACAATCTCATCTCATGATCAGATTTTCTGGTTCGGGGATTTGAATTATCGGATCAACATGTTGGATGTAGAGGTTAG AAAGTTGGTGGCTCTAAAGAAGTGGGATGCACTGATGAAAAGTGATCAGGTGAGTGAGTGACATATGAAACCCCCCACCTTATGAATATGTTGGACTTAT GTTCAGTTTTCACTTATATTTATTCAAGTATTCCACCTCCTCTGTTAATTTTTATAGTTGATTTATAATACTATAGTAAAATTTAAATCAAACATCAACC CTTAAGTGTAAGAAATCTTCTTAGTCAAGGCAATATCAAAGAAGTGATATCTTTTTACTGTTATGAGTTATGACCAAGGCAAACAACTATATTTTTCTTC TTATATCATGTTCTTTTATAATGACCACAAGTTATGCTAAACAAATTCTTATTGCTTCACCTAATACGTAGCTATGCAAAGAAATGCGTCCTGGGCACGT ATTTGATGGATGGAAAGAGGGGTTCATAAACTTCCCACCTACTTACAAGTATGAATTTAACTCTGATAGATATGTTGGTGAGAACCCAAAAGAAGGGGAA AAGAAGAGATCTCCAGCCTGGTATGTACAAGCCACATGTATCTAAACAAACCTATGAACTTTTTGTTGTTGGTAGCATATATTATAGTAAACATTGATAT TTGATAAGGTTTGGTAATGCTATCAGCAGTAGTTAATTTGGGTAAGATTATGCAGGTGCGATCGTATATTGTGGCAAGGAAAAGGAATAAAGCAACTTGA ATATGGGCGTGCAGAAATTAAGCTCTCAGATCATCGACCAGTTAGTTCTATTTTCTCAGTTGAAGTCGAAGTATTTGATCATCGCAAGCTAAAAAGAGCT CTAAATTTCACTAGTGCAGCAGTACACCCAGATATCTTCCTTGATGAACATGATGAATTATAATCACATGAGACATTCAATGAAAATGGGCATCTACAAT CATATTCATATATTAAATACTGGTTGTTAAAATCTTAGTTGCCTATGAAGTCATGTTTCCGATGAGAGAAAACTGGTGAACTCTTTCTAAATCGGGCGAT ATGTCCAATTCATTGATCACTCTACTCAAATGAGCTCTGCACGAAGTGTCCTTTATGATTAACTGGGATAACAATCATTTTTTGAATATGAATCAGTAAC AGAGAAGCCTTTAAGATAGTTATTATAACATGAAAATATAGATAGTCATACAATAGAATACACTGGGCCTTTTTTGTTATCCCGTTGATCTATAATAGAA TGATTATTTGAACTAGGATTTATCAGATTAAGTCATGTGCCTCATTTTTTTCTTCTTTGGACAATATACTTTAGGTGGGTCGTTTCTCTGTAACACTAGA CACATTCTATGTAATGTAAGCTAATATTGAATTGTACAAAGAACCTCGACTAGTAATGGTCTTGGCTGGTTTTTGCCAATTACATAAATATATTTTACCA TGTCTGGTCCTGGTTGCCACCCCTTTGGGCCTATGCATGTCTTTTCTTAGTACTCCATTTCATACAATAACTAGGAGCTGTATTCTATTCAAATTAGAGT GAAATAAGTG BLAST |
Tissue | pods |
Gene name | LI_gene_177550; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_346211
Blastp | Type I inositol polyphosphate 5-phosphatase 2 from Arabidopsis with 44.4% of identity |
---|---|
Blastx | Type I inositol polyphosphate 5-phosphatase 2 from Arabidopsis with 44.35% of identity |
Eggnog | inositol(COG5411) |
Kegg | Link to kegg annotations (AT4G18010) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019421088.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |