Ll_transcript_346212

• Id Trinity: TRINITY_DN50487_c0_g1_i12
• Name Transcript: Ll_transcript_346212
• Sequence: GAGGACCACTCGAGCAGTAGCATTATGCAAGTTGTGGTTGTGGTGGATATCTAGCTGATATGTTCACACGTTCAATTTCTGTCCTTTTCTACTTGCTCCT TATAAGGATCTTCTTTCAAATCAACATTCATTTAATCCCATATTTTTGTTGTGTTACTTTCAATCTGGGATACCCTCTTATTAAAATATGATTAATTGCT AAATAGCGCTGAATAAATGCTGAGATAGTGATTCGGTGATTCCATATTTAAGGAGTTGTGCTTTCAAAGTGTAGTGTAGCACAATACACAAGTCTTTTTT GGGTTCTGTTTTAGTCTTTTAAATTGAGGCAATGAAGGCAAGGAAAGGAAAACGCTCAGAGGGCTTTTGGCCTTCTCTTGTGATGAAAAAATGGTTAAAT GTGAAGCCTAAGGTGAATGATTTTAGTGAAGATGAAGTAGACACTGAAACTGAGAGTGAAGATGATGCTTCCTCTCCTAAATATTCAAGAATGCGCGAGT GTGAAGATAATCCACTTAAAACACAAGGAACCCAATCCATATTCTCAAGTCAAACATCAGATGCATCTTGTAAGGGTTACAAGATAAGTCACAGAAGAGG AAAATCAGAAACTCTGCGTGCTCAGTACATAAATACAAAGGAAGTGAGAGTAGCAATTGGCACTTGGAATGTTGCTGGAAAACATCCACATGAGGATCTT GAGATTGATGACTGGATTTGTGCTGAAGACCAAGCAGATATTTACATTCTTGGTTTCCAAGAGGTAGTTCCACTGAGTGCTGGAAATGTACTGGGAGCAG AGGATAATACACCGATTCATAAATGGGAGGCAATCATTCGAAGAATTTTAAACAAATCTTCTGAATCGGAAAGTGACAGTAAACACAAAAGCTATAGTGC CCCTCCTTCTCCAGTTTTAAGAACTTCATCTGCTGCTGATGTTCTGGCAGATAACTTAGATGCTAATGCAATAGATATAATGAATGAGGAGTATGTGGAA ATCGTTGACAATGACTTGTTGGAGCAGCAGGAATTGAAAAACATTAATTGTATAGGGAAGAATTTACAGTTGAATAGAATATATAACATGGATATTCAGC CTAGACTCGACTGGCCTGAACGTCCATTAGATGCAATCTCCCAAATTGTTGATTCCAATCCGAAGTTACGCAGAGTACTTAGTGGCTCAGATAGAATTGG ATTTAGCTGGAAGGACAACGCTTTAATACATGGCAGCGGATTGAAACGTTCACACCACAGTTCTGGAAACTTGGGTTTGTTATGTAAAGAGCAGCAAGTG ATTCCTAAAGAAGTAGTCGATTCCTTAGTAGCTGAAGTATCTGACATGCTATCAACTGAGAATGATGTTACTTTTAATGAATTACCTAATGCCCAAGATG ATTATGGATTAGACGCAATGAAATCGAGTCCAAGGTATATCCGAATTGTCAGTAAGCAGATGGTAGGGATATATGTATCTGTTTGGGTGCAGAGAAGGTT GAGAAGGCACATCAATAATTTGAAAGTTTCTCCAGTTGGAATTGGTCTTATGGGATATATGGGAAATAAGGGGTCAGTTTCGATTAGTTTGTCTCTCTTT CAATCGCGTCTTTGCTTTGTTTGTTCCCATCTTTCTTCTGGTCAGAAAGATGGACAGAGGCGAAACTCTGATGTTCATGAAATTCTCCGACGCACTTGCT TCTCATCCGTCTTTGATCCAGATCAGCCACAAACAATCTCATCTCATGATCAGATTTTCTGGTTCGGGGATTTGAATTATCGGATCAACATGTTGGATGT AGAGGTTAGAAAGTTGGTGGCTCTAAAGAAGTGGGATGCACTGATGAAAAGTGATCAGCTATGCAAAGAAATGCGTCCTGGGCACGTATTTGATGGATGG AAAGAGGGGTTCATAAACTTCCCACCTACTTACAAGTATGAATTTAACTCTGATAGATATGTTGGTGAGAACCCAAAAGAAGGGGAAAAGAAGAGATCTC CAGCCTGGTGCGATCGTATATTGTGGCAAGGAAAAGGAATAAAGCAACTTGAATATGGGCGTGCAGAAATTAAGCTCTCAGATCATCGACCAGTTAGTTC TATTTTCTCAGTTGAAGTCGAAGTATTTGATCATCGCAAGCTAAAAAGAGCTCTAAATTTCACTAGTGCAGCAGTACACCCAGATATCTTCCTTGATGAA CATGATGAATTATAATCACATGAGACATTCAATGAAAATGGGCATCTACAATCATATTCATATATTAAATACTGGTTGTTAAAATCTTAGTTGCCTATGA AGTCATGTTTCCGATGAGAGAAAACTGGTGAACTCTTTCTAAATCGGGCGATATGTCCAATTCATTGATCACTCTACTCAAATGAGCTCTGCACGAAGTG TCCTTTATGATTAACTGGGATAACAATCATTTTTTGAATATGAATCAGTAACAGAGAAGCCTTTAAGATAGTTATTATAACATGAAAATATAGATAGTCA TACAATAGAATACACTGGGCCTTTTTTGTTATCCCGTTGATCTATAATAGAATGATTATTTGAACTAGGATTTATCAGATTAAGTCATGTGCCTCATTTT TTTCTTCTTTGGACAATATACTTTAGGTGGGTCGTTTCTCTGTAACACTAGACACATTCTATGTAATGTAAGCTAATATTGAATTGTACAAAGAACCTCG ACTAGTAATGGTCTTGGCTGGTTTTTGCCAATTACATAAATATATTTTACCATGTCTGGTCCTGGTTGCCACCCCTTTGGGCCTATGCATGTCTTTTCTT AGTACTCCATTTCATACAATAACTAGGAGCTGTATTCTATTCAAATTAGAGTGAAATAAGTG
• Tissue: pods
• Gene name: LI_gene_177550;
• Additional information: details;

Expression of Ll_transcript_346212

FPKM

• PAB: 3.2
• PNAB: 2.2
• PS1: 5.8
• PS2: 1.3
• PS3: 2.1
• PW1: 5.6
• PW2: 6.7
• PW3: 8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_346212

• Blastp: Type I inositol polyphosphate 5-phosphatase 2 from Arabidopsis with 52.86% of identity
• Blastx: Type I inositol polyphosphate 5-phosphatase 2 from Arabidopsis with 52.88% of identity
• Eggnog: inositol(COG5411)
• Kegg: Link to kegg annotations (AT4G18010)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421088.1)
• Pfam: Endonuclease/Exonuclease/phosphatase family (PF03372.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;