| Id Trinity | TRINITY_DN50487_c0_g1_i22 |
|---|---|
| Name Transcript | Ll_transcript_346228 |
| Sequence | GCCAAAGAAACTTTTTAAGTCAACCCACCTTGGTTAATTTTGCGAATTTCAAATTATTACCTATTCTTGTCACCTGATTAGCTCAGAGTGTTAAAATCAG TGATATTTGTAATTCAGATGCATCTTGTAAGGGTTACAAGATAAGTCACAGAAGAGGAAAATCAGAAACTCTGCGTGCTCAGTACATAAATACAAAGGAA GTGAGGTCTGGTGGCAATCTAGTTATACAACATGATGTTGGAGTTATTAATTTAATGATATCGACAAAATGCATCTTGAATTCGGATATTATGCTTGCAG AGTAGCAATTGGCACTTGGAATGTTGCTGGAAAACATCCACATGAGGATCTTGAGATTGATGACTGGATTTGTGCTGAAGACCAAGCAGATATTTACATT CTTGGTTTCCAAGAGGTAGTTCCACTGAGTGCTGGAAATGTACTGGGAGCAGAGGATAATACACCGATTCATAAATGGGAGGCAATCATTCGAAGAATTT TAAACAAATCTTCTGAATCGGAAAGTGACAGTAAACACAAAAGCTATAGTGCCCCTCCTTCTCCAGTTTTAAGAACTTCATCTGCTGCTGATGTTCTGGC AGATAACTTAGATGCTAATGCAATAGATATAATGAATGAGGAGTATGTGGAAATCGTTGACAATGACTTGTTGGAGCAGCAGGAATTGAAAAACATTAAT TGTATAGGGAAGAATTTACAGTTGAATAGAATATATAACATGGATATTCAGCCTAGACTCGACTGGCCTGAACGTCCATTAGATGCAATCTCCCAAATTG TTGATTCCAATCCGAAGTTACGCAGAGTACTTAGTGGCTCAGATAGAATTGGATTTAGCTGGAAGGACAACGCTTTAATACATGGCAGCGGATTGAAACG TTCACACCACAGTTCTGGAAACTTGGGTTTGTTATGTAAAGAGCAGCAAGTGATTCCTAAAGAAGTAGTCGATTCCTTAGTAGCTGAAGTATCTGACATG CTATCAACTGAGAATGATGTTACTTTTAATGAATTACCTAATGCCCAAGATGATTATGGATTAGACGCAATGAAATCGAGTCCAAGGTATATCCGAATTG TCAGTAAGCAGATGGTAGGGATATATGTATCTGTTTGGGTGCAGAGAAGGTTGAGAAGGCACATCAATAATTTGAAAGTTTCTCCAGTTGGAATTGGTCT TATGGGATATATGGGAAATAAGGGGTCAGTTTCGATTAGTTTGTCTCTCTTTCAATCGCGTCTTTGCTTTGTTTGTTCCCATCTTTCTTCTGGTCAGAAA GATGGACAGAGGCGAAACTCTGATGTTCATGAAATTCTCCGACGCACTTGCTTCTCATCCGTCTTTGATCCAGATCAGCCACAAACAATCTCATCTCATG ATCAGATTTTCTGGTTCGGGGATTTGAATTATCGGATCAACATGTTGGATGTAGAGGTTAGAAAGTTGGTGGCTCTAAAGAAGTGGGATGCACTGATGAA AAGTGATCAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_177550; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_346228
| Blastp | Type I inositol polyphosphate 5-phosphatase 2 from Arabidopsis with 47.62% of identity |
|---|---|
| Blastx | Type I inositol polyphosphate 5-phosphatase 2 from Arabidopsis with 47.15% of identity |
| Eggnog | inositol(COG5411) |
| Kegg | Link to kegg annotations (AT4G18010) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421088.1) |
| Pfam | Endonuclease/Exonuclease/phosphatase family (PF03372.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |