Ll_transcript_346197

• Id Trinity: TRINITY_DN50487_c0_g2_i2
• Name Transcript: Ll_transcript_346197
• Sequence: TTTGTTTAGTTAATTATTACAACCTGAGAAGAACTATTATTTAAATATTAACTGTCAAATATTGGCCTAACAAATGTTAGGGACTCGTTTCCATATTTAA GAGCATGAGCTTTGAAAGTCTGACACTAGTAACAACAGCTTTTTTGGTTCAGTTATTATAGTCTTTAGACCTGAGACAATGAAAACAAGGAGAGGAAGAA GATCAGAGGCCTTTTGGCCCTCCATTGTGATGAAGAAATGGTTAAACATAAAGCCAAAGGTATATGATTTTAGTGAAGATGAAGTGGATACTGAAACTGA AGCTGGGAGTGAAGATGATGCTTGTTCTCTTAAAGATTCAAGAATGGGCTTGCATGAAGATAATCCATGTAAAACACAACCCATATTTCCATCTCAAACA TCAGATGCTGTTTGTAAGGGCTACAAGATGAGACACAGGAGAGGAAAATCAGAAACTCTGCGTGCTCAGTACATAAATAAAAAGGAAGTGAGGATAACAA TTGGTACTTGGAATGTTGCTGGAAAACTTCCATGCAAGGATCTTGAGATTGAGGACTGGCTTTGTACTGAAGAACCAGCAGATATTTACATTATTGGTTT TCAAGAGGTAGTTCCATTGAATGCTGGAAATGTACTTGGAGCAGAGGATAATACTCCAATCCCAAAATGGGAGGCAATCATAAGAAGAACTCTAAACAAA TCTTCTGAACCTGAAAGTAAACACACAAGCTATAGTGCTCCTACTTCTCCTGTACATGCTTCGGCTGCTGATACTCTAGCAGATAGTATTGATGTTAATC CATTAGATATCGAAACTTTCGACTATGACGATATGGAACAGCAGGAGGTGGAAAAAATAATTGGTATAGGAAAGAATTTACAGTTGAGAAATATATATGG TGTTGTTGATCATAAGACTAGACTTGACTGGCCTGAACTCCCATTAGATGCAATCCCTCAAGTAGATTCAAATCCAAAATTGAGAAGAGTATTGAGCAGC TCAGCAAGAATTGGCTTTAGCTGGATGGAGAGTAATGATTTGGTACATGGCAGTGGCGGCGGTGGTGGTGGAATGAAACGCTCGCATCATAGTTCTGGAA ACTTGAGTTTGTTTTGGAAAGAGCAGCAAATGATGCCTGAAGTAGCAACTGACTCACTTGATGTATCTGACATTTTATCCGATGAGGAAGACGATGATTT TCTTGAATTACCAAATAACCAAGATGATGATGATAACGGACTAGGCAACATGAAGTCACATCCTAAGTATGTCAGGATTGTTAGTAAGCAGATGGTGGGG ATATATGTATCTATTTGGGTGCAGAGAAAGTTAAGAAGGCACATCAATAATTTGAAAGTTTCTCAAGTTGGAATTGGTCTTATGGGCTACATGGGAAACA AGGGGTCTGTTTCAGTTAGCATGTCTCTCTTTCAGTCACGTTTGTGCTTTGTTTGTTCTCATCTGACTTCTGGTCAGAAGGATGGAGCTGAACATAAACG GAATGCGGATGTTCAAGAAATTATTCGACGCACTTGCTTCTCATCTGTCATTGATAAAGATCAACCACAAACAATCCCATCTCATGATAAGATTTTCTGG TTTGGAGATTTGAATTATCGAATGAATATGTTGGATGCGGAGGTTCGAAAGCTGGTGGATTTAAAGAAATGGGATGAGCTGATAAATTATGACCAGCTAA GCAATGAATTATACAGTGGGCATGTATTTGAAGGATGGAAAGAGGGCTTAATAAACTTCCCTCCTACTTACAAATATGAATTTAATTCTGATAAATATTT TGGTGAGAACCCAAAAGAAGGGGAAAAGAAAAGATCTCCAGCCTGGTGTGATCGTATTTTGTGGCTAGGAAAAGGAATAAAGCAACTTAAATATGGGAGT GCAGCAAATAAGCTCTCAGATCATAGAGCAGTTAGTTCAATATTCTTGGTTGATGTTGAAGTATTTGACCATCACAAGCTACAAAAAGCTCTAAATTTTA CTAGTACAGCAGTGCACCCAGAGCCAGAGGTCTACTTTATGGATGATGTTGACTTCCAATCATACTAAAAAAGAATCGCAAGTTATTGCATTTGTTTTTA TATTGAAAGGTAAAATTTTCGATCATATTTCATGTAAAGGGTATGATGAGTAATAGATCTACATCTTCACTGAGGAGGATCCGAAGTTCCTAACCCCAGC AAAGATGCGGATCTACGATAATCATACAAGTCATCTACATTTTTGAGCTGTTACTTAGGAAATAATTTTGGCTGGTAAAGAAAATGAATAATACATAAGT CTTATCTGTTGTTCTAACTGTAAGTACTTTTTCATTAAGAACATAAGTAGCATCTTATCAAATACAATAAATGTATAGCATGTAACAGAACTGTTTACAA ATGTTGTGGTTTTATTGAATAGGAATACTAGAAAGATTCAAAA
• Tissue: pods
• Gene name: LI_gene_177554;
• Additional information: details;

Expression of Ll_transcript_346197

FPKM

• PAB: 4
• PNAB: 1.7
• PS1: 1
• PS2: 0.7
• PS3: 1.4
• PW1: 4.2
• PW2: 8.4
• PW3: 6.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_346197

• Blastp: Type I inositol polyphosphate 5-phosphatase 2 from Arabidopsis with 54.52% of identity
• Blastx: Type I inositol polyphosphate 5-phosphatase 2 from Arabidopsis with 72.14% of identity
• Eggnog: inositol(COG5411)
• Kegg: Link to kegg annotations (AT4G18010)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445990.1)
• Pfam: Endonuclease/Exonuclease/phosphatase family (PF03372.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;