Id Trinity | TRINITY_DN50487_c0_g2_i7 |
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Name Transcript | Ll_transcript_346223 |
Sequence | TTTGTTTAGTTAATTATTACAACCTGAGAAGAACTATTATTTAAATATTAACTGTCAAATATTGGCCTAACAAATGTTAGGGACTCGTTTCCATATTTAA GAGCATGAGCTTTGAAAGTCTGACACTAGTAACAACAGCTTTTTTGGTTCAGTTATTATAGTCTTTAGACCTGAGACAATGAAAACAAGGAGAGGAAGAA GATCAGAGGCCTTTTGGCCCTCCATTGTGATGAAGAAATGGTTAAACATAAAGCCAAAGGTATATGATTTTAGTGAAGATGAAGTGGATACTGAAACTGA AGCTGGGAGTGAAGATGATGCTTGTTCTCTTAAAGATTCAAGAATGGGCTTGCATGAAGATAATCCATGTAAAACACAACCCATATTTCCATCTCAAACA TCAGATGCTGTTTGTAAGGGCTACAAGATGAGACACAGGAGAGGAAAATCAGAAACTCTGCGTGCTCAGTACATAAATAAAAAGGAAGTGAGGATAACAA TTGGTACTTGGAATGTTGCTGGAAAACTTCCATGCAAGGATCTTGAGATTGAGGACTGGCTTTGTACTGAAGAACCAGCAGATATTTACATTATTGGTTT TCAAGAGGTAGTTCCATTGAATGCTGGAAATGTACTTGGAGCAGAGGATAATACTCCAATCCCAAAATGGGAGGCAATCATAAGAAGAACTCTAAACAAA TCTTCTGAACCTGAAAGTAAACACACAAGCTATAGTGCTCCTACTTCTCCTGTACATGCTTCGGCTGCTGATACTCTAGCAGATAGTATTGATGTTAATC CATTAGATATCGAAACTTTCGACTATGACGATATGGAACAGCAGGAGGTGGAAAAAATAATTGGTATAGGAAAGAATTTACAGTTGAGAAATATATATGG TGTTGTTGATCATAAGACTAGACTTGACTGGCCTGAACTCCCATTAGATGCAATCCCTCAAGTAGATTCAAATCCAAAATTGAGAAGAGTATTGAGCAGC TCAGCAAGAATTGGCTTTAGCTGGATGGAGAGTAATGATTTGGTACATGGCAGTGGCGGCGGTGGTGGTGGAATGAAACGCTCGCATCATAGTTCTGGAA ACTTGAGTTTGTTTTGGAAAGAGCAGCAAATGATGCCTGAAGTAGCAACTGACTCACTTGATGTATCTGACATTTTATCCGATGAGGAAGACGATGATTT TCTTGAATTACCAAATAACCAAGATGATGATGATAACGGACTAGGCAACATGAAGTCACATCCTAAGTATGTCAGGATTGTTAGTAAGCAGATGGTGGGG ATATATGTATCTATTTGGGTGCAGAGAAAGTTAAGAAGGCACATCAATAATTTGAAAGTTTCTCAAGTTGGAATTGGTCTTATGGGCTACATGGGAAACA AGGGGTCTGTTTCAGTTAGCATGTCTCTCTTTCAGTCACGTTTGTGCTTTGTTTGTTCTCATCTGACTTCTGGTCAGAAGGATGGAGCTGAACATAAACG GAATGCGGATGTTCAAGAAATTATTCGACGCACTTGCTTCTCATCTGTCATTGATAAAGATCAACCACAAACAATCCCATCTCATGATAAGATTTTCTGG TTTGGAGATTTGAATTATCGAATGAATATGTTGGATGCGGAGGTTCGAAAGCTGGTGGATTTAAAGAAATGGGATGAGCTGATAAATTATGACCAGCTAA GCAATGAATTATACAGTGGGCATGTATTTGAAGGATGGAAAGAGGGCTTAATAAACTTCCCTCCTACTTACAAATATGAATTTAATTCTGATAAATATTT TGGTGAGAACCCAAAAGAAGGGGAAAAGAAAAGATCTCCAGCCTGGTAAGTGCAACTCTGTATAGCAAACAAGTGACTATTTTTGCATCAATATGTGCTT ATTGGACACAACCAATAAAAATGTTAACATAACTTTAAAATGTTTTCAGCAAATGCTTAATTAAGATTGTGATTAGTTGTTCCCAACAGACACAGTGGCA CACTATGACACTATTACACTACCCATGCAAGATTCATTGATGGATACATGCATTAGACACTTAATACTTATTAGGGAAAATAAGATGTTGTAAGTGATAA TATAAGATTATGCAGGTGTGATCGTATTTTGTGGCTAGGAAAAGGAATAAAGCAACTTAAATATGGGAGTGCAGCAAATAAGCTCTCAGATCATAGAGCA GTTAGTTCAATATTCTTGGTTGATGTTGAAGTATTTGACCATCACAAGCTACAAAAAGCTCTAAATTTTACTAGTACAGCAGTGCACCCAGAGCCAGAGG TCTACTTTATGGATGATGTTGACTTCCAATCATACTAAAAAAGAATCGCAAGTTATTGCATTTGTTTTTATATTGAAAGGTAAAATTTTCGATCATATTT CATGTAAAGGGTATGATGAGTAATAGATCTACATCTTCACTGAGGAGGATCCGAAGTTCCTAACCCCAGCAAAGATGCGGATCTACGATAATCATACAAG TCATCTACATTTTTGAGCTGTTACTTAGGAAATAATTTTGGCTGGTAAAGAAAATGAATAATACATAAGTCTTATCTGTTGTTCTAACTGTAAGTACTTT TTCATTAAGAACATAAGTAGCATCTTATCAAATACAATAAATGTATAGCATGTAACAGAACTGTTTACAAATGTTGTGGTTTTATTGAATAGGAATACTA GAAAGATTCAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_177554; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_346223
Blastp | Type I inositol polyphosphate 5-phosphatase 2 from Arabidopsis with 53.68% of identity |
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Blastx | Type I inositol polyphosphate 5-phosphatase 2 from Arabidopsis with 74.87% of identity |
Eggnog | inositol(COG5411) |
Kegg | Link to kegg annotations (AT4G18010) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019445990.1) |
Pfam | Endonuclease/Exonuclease/phosphatase family (PF03372.22) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |