| Id Trinity | TRINITY_DN50491_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_345074 |
| Sequence | TTTACTTATTGCTGTGTCTAATTCTAGCTTCTAGTGTCAAAATTGGCCTTGTCTGCAACTTTTGTATTTTGTTACTTTTGTAATCTCTACATATATCATA TATGCTATGTTTACTAAAGTACTTACTACTTGGTACATGTTTTTTGATTATGGCATAGTCACTTTTCATGAACCATTAGACTGAACTATATATAATATGC ACTTTCTAACATGTCTTACCCTCTTTCAGGAGATATATCAAGGTGCCCTTGTGATGCATTGGTGTTTGAAGATGAATCAGAGAAGTCGAGCAATGCACTT CTTGCTCGAGCATGGTCACCCGGGTGGAGCAATGCGGACAAGGCCTTGACAACATTCATAAACGGTCCACTAATTGAGTATTCCGAAAATCGCAGGAAGG CTGACAGTGCCACAACCTCATTTCTCTCCCCGCATTTGCATTTTGGTGAGGTGAGTGTCAAGAAAGTTTTCCATCTTGTTCGGATTAAGCAAGTGCTCTG GGCCAATGAAGGAAACAAGGCTGGTGAGGAAAGTGTGAACTTGTTTCTCAAGTCTATTGGTCTTAGAGAGTATTCAAGGTACATCAGTTTCAACCATCCC TATAGTCATGAAAGGCCTCTTCTAGGCCACCTCAAGTTTTTTCCTTGGGTAGTCAATGAAGGATATTTTAAGGCATGGAGACAAGGCAGAACAGGCTACC CTTTAGTGGATGCTGGCATGAGAGAGTTGTGGGCCACTGGTTGGCTTCATGATCGGATACGTGTTGTAGTTTCGAGTTTCTTCGTGAAAGTTCTGCAGCT TCCTTGGAGATGGGGGATGAAATATTTCTGGGATACCCTCTTGGATGCTGATCTTGAGAGTGATGCTCTTGGTTGGCAGTACATAACTGGTACTCTACCC GATGGTCGCGAATTTGACAGAATAGATAATCCACAGTTTGAGGGATACAAATTTGATCCGAATGGAGAATATGTAAGACGCTGGCTTCCCGAGCTTTCCA GATTACCAACTCAATGGATACATCATCCATGGAACACACCAGAATCGGTACTCCAAGCTGCTGGTATTGAACTTGGGTCAAATTACCCTCTTCCAATTGT CGGAATAGACGAAGCGAAAGCAAGGTTGCAAGAAGCACTTATACAAATGTGGCAACAAGAAGCAGCTTATAGAGCTGCAACTGAAAATGGAACTGAGGAA GGGCTTGGAGAGTCATTTGAATCAACTCCAATTGCTTTTCCTGAGGACATACAAATGGAGGAAAGACATGAACCTGCGAGGAACAATACTCCTGCTGCAG CGACTCGGCGCTACGAGGATCAGATGGTGCCTAGTATCACTTCTTCCTTGGTGAGAGCGGAAGGGGAAGAAACTTCTTTGGATGTTCAAAACTCAGCCGA AGAGAGCAGAGCTGAAGTTCCAATAAATGTGAATGCACAAGAAAATGCAAGAGAGACAGTGTTTCACACTGCTAACAGAAACACTCAACTACAGCATAAT AACAATAATACAATGAGGTTTCGAAATGGAGCCGAAGATTCCACAGCTGAATCTTCAAGTAGTACTAGGAGAGAAAGGGATGGAGGAGAAGTTCCGGTAT GGTCTCCGACGGCTTCTAGTTACCCAGAGCCATTTGTAGATGATGAAAATGGTTTAGGATCCAGCTCATCTTACTTACAGAGGCATCCTCAGTCTCACCA ATTGATGAATTGGACAAGATTACCTCAGACTGGGTAATTCACTTCTAAACCAAGCAGACTAGAGAAGCAGGTAGGTGGAAAATGAATTCTCCTCTTCTTT TGGAAAGTGTGATGGCAAACCTCTCATTGAACATACATATACATGTGTTCATTTCCTACTCCTTAAACCAGCATGACATTTGATTAATGCTGACTTCCAA ATTTGTATGAAAATTTCAATTCATAGAGGCAGTTTCTTTTGCTTTCTTATACAATATGTCTAGGCCTACTTTATAGTATATTCTGTGCAGTGAGGGAGAG AGAGCCATTATTGGATCTTTAGTCCTCTAATAAACTAAGGTTTGTGATTATCATTTAAGGTAGATATATCACTTTATAATCTCGGCGTTCTTCACTAGTT TAATAGTGAAAAGTTTCTTTACATTAAGAGTATCATTCTGTCCATGTAAAAATGTATACACAATCGTTACATTATTTTGAAGACAGTCAATGATGATTAA ACATAAATAATAAATGATACACTCAGAATGTATAAAACTCACATACTATCTGCGTATGCATTTTTTTTCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_177581; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_345074
| Blastp | Cryptochrome-1 from Arabidopsis with 76.86% of identity |
|---|---|
| Blastx | Cryptochrome-1 from Arabidopsis with 76.27% of identity |
| Eggnog | deoxyribo-dipyrimidine photolyase(COG0415) |
| Kegg | Link to kegg annotations (AT4G08920) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019430896.1) |
| Pfam | FAD binding domain of DNA photolyase (PF03441.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |