Ll_transcript_345080

• Id Trinity: TRINITY_DN50491_c0_g1_i7
• Name Transcript: Ll_transcript_345080
• Sequence: GGATAATGTTGCATGCTTTTTGTGGGTTGTGAATTGGAAAATGTTGAAACGCAAAAGAAAGAGAGAGAAAAATATAATAGAATTTTAGGCTGCGACTGTA TCTATCATTCTCAGATTCTCTGTCTTGTCACGTGTATCGAAGTAGAAGGAACTAGAGCCAGGGATATGATATGTTTTGTTGCATAAGATAATAATAGATA AATGAAAATCTACACAACATAAAAAAAAATTTGTGGTTGCAGTTTGTCTATCAATTCACTTGTTTGTATCCCCCACTAGTTAACCAATCTTCTTCACTTC CTCCTTTTCTCTCTCTTCTCTCCTTGGACCCTCTCTCTCTTTTTCTTCACTAGCAACTTGGGTGAAAGAACCAAAATCAGAATTTGCTGGAAACAATTCC CTCACTCAAAGAAACGCTAAAGTGTGGGGGAAGGACAAGTAAAAGATAAGAGGCAATACCCAATTATAAAATTGTGTTTTTGTTATCTCTTTATGTCTTC AACGTCTTCATTATTAAGGAAAACCCAAAAAAAGATAGGATCATTAAGAGTTATTAGCATCAGTTGGTGAGATTTAGTACTATAAAAAAGGAAGGTAAGA GATCTGGTATATGGTTAAGAGTGTGTTTGTGTGTGAATAAGGTTAGTGGAGATGTCAAGTGGTGGATGCAGCATAGTTTGGTTTAGAAGGGATCTGAGGG TTGAGGATAACCCTGCACTGATGGCAGGAGTAAGAGCAGGATCTGTTGTTGCTGTTTTCATTTGGGCTCCTGAAGAAGAAGGTCAATATCAACCTGGAAG GGTTTCAAGGTGGTGGCTTAAGCATAGTTTGGCTTACCTTGATTCATCTTTGAGAAATCTTGGCACTCCTCTTATTACCAAGAGATCCACTGATAGTGTT TCTGCTTTATTAGAGGTTGTTAAGTCCACTGGTGCTACTCAACTTTTCTTTAACCACTTATATGATCCGTTGTCACTTATCAGGGATCACCGATCAAAGG AGGTTCTGACTGCTCATGGCATAACCGTGCGTTCGTTTAATTCGGACTTATTATATGAACCATGGGATGTCAATGATGACCATGGCCAACCTTTCACAAC TTTCGATGCTTTTTGGGAAAGATGCCTCAACATGCCTTATGACCCACAATCACCTTCTCTCCCACCTAAAAGGATTATTCCAGGAGATACATCAAGGTGC ACGAGTGATACATTGGTGTTTGAAGATGAATCAGAGAAGTCGAGCAATGCACTTCTTGCTCGAGCATGGTCACCCGGGTGGAGTAATGCAGACAAGGCTT TGACAACATTTATAAATGGTCCACTGATCGAGTACTCAGAAAATCGCCGGAAGGCTGACAGTGCAACAACCTCATTTCTGTCCCCTCATTTGCATTTTGG TGAGGTGAGTGTCAAGAAAGTTTTCCATCTTGTTCGGATCAAGCAAGTGCTTTGGGCCAATGAAGGAAATAAGGCTGGTGAAGAAAGTGTTAACTTGTTT CTCAAGTCTATTGGGCTTAGAGAGTATTCGAGGTACATCAGTTTCAACCATCCATATAGTCATGAAAGGCCTCTTCTAGGCCACCTCAAGTTTTTTCCTT GGGTGGTGAATGAAGGCTATTTTAAGGCGTGGAGACAAGGTAGAACAGGATACCCATTGGTGGATGCTGGCATGAGAGAGTTGTGGGCCACTGGTTGGCT TCATGATCGTATACGTGTTGTTGTTTCTAGTTTCTTTGTGAAGGTTCTGCAGCTTCCGTGGAGATGGGGAATGAAGTATTTCTGGGATACCCTGTTAGAT GCTGATCTTGAGAGTGATGCTCTTGGTTGGCAGTACATAACTGGTACCCTACCTGATGGTCGCGAATTTGACCGAATAGATAATCCACAGTTTGAGGGAT ACAGATTTGACCCCAACGGAGAATATGTACGACGCTGGCTTCCTGAACTTTCCAGATTACCAACTCAATGGATACATCATCCATGGAACACACCAGAATC GGTACTCCAAGCTGCTGGTATTGAACTTGGATCAAACTACCCTCTTCCAATTGTGGGAATAGATGAAGCAAAAGCAAGACTGCAACAAGCACTTCTACAA ATGTGGCAACAAGAAGCAGCTTATAGAGCTGCAACTGAAAATGGCACCGAGGAGGGGCTTGGAGATTCCTTTGAGTCAACCCCGATTGCTTTTCCCGATG ACATACAAATGGAGGAAAGACATGAACCTGTTAGGAACAATCCTCCTGCTTCTGCAGCTACTCGACGCTACGAGGATCAGATGGTCCCGAGCATCACTTC TTCCTTGGTGAGAGTGGAAGAGGAAGAAACTTCTTCGGATGTTCAAAACTCAGCAGAAGAGAACAGAGCTGAAGTTCCAGTAAATGTGATTGCACAACAA AATGCAAGAGAGATGGCGTTGCGCACTGCTAACAGGAACACTCAACTACCGCATAATAATACCACAATGTGGTTGAGTAATGCAGCTGAAGATTCTACAG CAGAATCTTCAAGTAGTACTAGGAGAGAAAGGGGTGGAGGTGAAGTTCCGGTGTGGTCTCCCACAGCTTCTAGTTACCCAGAGCCATTTGTAGATGATGA AAATGGTATCGGAGCCAGTTCATCTTACTTGCAGAGGCATCCCCAGTCTCACCAATTGATGAATTGGACAAGGTTACCTCAGACTGGGTAATTCACTTCT AAAACAATCAGACTAGAGAAGCAGGTAGGTGGAAAGTGCACTCTTCTCTTCTTTCGGAAAGTGGGACGGAGAACCTCGCATCGGGCACACATATGCTTGT GTTCATTTCCTACTTCTTAAACCAATCATGACATTTATTAATGGCTGACTTCCAAATGTGTATGGAAAGTTCAATTCATACAGGCAGTTTCATCTGCAGT CTCTTTTGTTTTCTTCTACAATATGTGTAGGTCTACTGTGTAGTATATTTTGTGCAGTGAAAAAGAAGGAACCAGTAGTGGATCTTTACTCCTCTAATAA ACTCATGTTTGTGATTATCATTTAAGGTAGATATATCACTTTTATAATCTCTGCCTTCACGTGAGTTTAATAGTGTAAAGTTTCTTTACATTATCGTTAA AAATATTGGACTTTCTAGATAATTGTTGCGATACTCAAGCTTTTTAAATGATCTAGCAATATAAGATTAGGTGATAGTGTTTTTTGGTGTACATTAAAGT TAAATCGTGTATATATTTTCTTTCCTGTGTATCCTTGTTGACCCCTTGTTTTCGAAATTCTTCC
• Tissue: pods
• Gene name: LI_gene_177581;
• Additional information: details;

Expression of Ll_transcript_345080

FPKM

• PAB: 27.9
• PNAB: 25.7
• PS1: 21.5
• PS2: 12.7
• PS3: 16.4
• PW1: 17.3
• PW2: 23.3
• PW3: 26.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_345080

• Blastp: Cryptochrome-1 from Arabidopsis with 77.35% of identity
• Blastx: Cryptochrome-1 from Arabidopsis with 77.35% of identity
• Eggnog: deoxyribo-dipyrimidine photolyase(COG0415)
• Kegg: Link to kegg annotations (AT4G08920)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461067.1)
• Pfam: DNA photolyase (PF00875.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;