Ll_transcript_344442

• Id Trinity: TRINITY_DN50493_c0_g1_i10
• Name Transcript: Ll_transcript_344442
• Sequence: GTTAAAGGAAGGGTTTTATTTGGTATACACAGTGACTGCTACATCATTTCAATGGCGGTAGAGAAAACCGAACAAGAACTCCGCAAAGAGATCGATGAGC TTCTTCGCCAACAACGCGATATTACTGAGCGCCTTCGTGATCCTCGTGGCCTTCGTAGAGGATCTGCTTTCTCATCTCTCGCTCCTCGCAACGGAATTCG TCAACGTCCCTTTCCTCCAAATGGAGAGAGGAATGAATTGGAAGATCAACCTCCTGCCAAGCGTAGACTTTCGTCGGCTGTCGTCAAGGTAGTTGAGGAT GGAGAGTTGGTTGAAGATGATGCTGTTGCGGTGAAGACTAATGGGACTGCCATGGCCCCCCACAGTGATAGCATGCCATTTCATCATCAAAACCAAAGAG CTTCCAGGGTGGATTCGGACATTCCTACTGCAGAACATGTACCAAGGGTATTACCAAAGGATGAGGATCCACGCTTGGTTAATAGGAATAGAAGAATGCT GGGTCAGCTTCTTGGAACTTTGGAGAAATTTCGAAAGGAAGACAAGCAACTCTCCGGAACAGAGGCATATGTTCGAAGATCCAATTCCTTGCAAAGAGCT GAGCAAAGAGCACGTGAAGAAAGTGAAAGGCTAAGAATAGAAGAGCGTGAACAGATTGCTGAAAAGCGGAGGAGAGACATGACTCTTAGGGCACGCGTGT CTGCTAAGACTGAAGAAAAGAAATTGGAGTTGCTGTTTCTTCAGTGGAGTGAGCATCAGAAAAAATTAAGCAATTTTATAAGGTTATTTTTAATTTTGGT CCAAAAGTGTCCATATTCACATTTTATTGAGACCAAGATAAGTTTCTGTCCATGTGTATTGTAGTGTTGAAGTAACTTGATGACTGGATGGATCCTGCTA ATTGCATGATTTTTGGTAGAAATGTGAAAGTTTTTCCTTTTATTATTTTGGATCGTTGTTTGATTGAACGTGGCATGCATTTTCCCCAGGACTAAGGCAG AACCTCCAATATACTATTTCCTGAAGAAGCCCTTGGATGATGAAGCTGCTTCCTCTGCGAAGTCGAAAGAAGAGGCTTTTCTGGAATGGAAGAATGCAAG GAGAGAAGAATTGTCTGAGTATCAGAAACAGATTGGGGAGCAGTACCTAGCCAACGTCGAGAAGGATATGGAGAGATGGCAAAATGCAAGAAAAGCAAGG AAAGGAAACAATGAACAGGATTTACAGGAAAGTATGGACAAAGAATTGGATACACATAGGCTGGAGCATGGTCCCAAGAAACGAAAAATACCCGACGGAA GCACCAATGAAGATGATGACGACGACGTGGAAGATATAAATGTTGGAGAAGATGACCTGATGGATGATGTGTTAGTTGATGAACCAAGTGTGGCTGAAGC TGGTAACCCCATTGCAGATCCTGCATCTCATTCTGATAATGTAGAGTTGAAGTGATAATGAAGAGTTCCTATTTTTCAATATGCTTTTAGTTTTTCATGA ACATTGAACAACCCTTTGGTTGCAAATGAGAAAAACCTATCTTGTAATTTTGGTTTGATGGATGCTGTTTTTGTGTAGTTTTATTTGATCATAGAAAAGT TTGCTGAAAAATCATGGAACACTGAAGGAGTTATTGCTCCAATATCTTTTTTGCATTTGAGAGATTATGAAGACAGCTAGAAAAGTTATTGATCAAAATG CACCAATGTTTCCCCTGCCTTTAAA
• Tissue: pods
• Gene name: LI_gene_177597;
• Additional information: details;

Expression of Ll_transcript_344442

FPKM

• PAB: 0.9
• PNAB: 21.3
• PS1: 24.3
• PS2: 23.7
• PS3: 31.5
• PW1: 20.8
• PW2: 17.7
• PW3: 14.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_344442

• Blastp: Pinin from Canis with 36.43% of identity
• Blastx: -
• Eggnog: Pinin, desmosome associated protein(ENOG4110W63)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447533.1)
• Pfam: pinin/SDK/memA/ protein conserved region (PF04696.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;