Ll_transcript_402542

Id TrinityTRINITY_DN50503_c0_g2_i10
Name TranscriptLl_transcript_402542
SequenceGTGAGATCTCTCTCCTAGTTTTTTTTCGTTTTCTATTGTTTTGTTACTATGTTATTGTTGAAATACAATTATATGGTTATATTTGATGTAATAGTCACTT GTTGTCTTTATTGGATTTTAGGGAGATTGATGAAACTTGAGATTTTTTGTTTTCAATGTGAAATGTTTGTTGCTTTGAGCTGACTTGTGTGTGAAAAGTG GCTTTTGACCTTTCGAAAAAAAGAAAGTAAATTTGCTCTTTTGTTGGGTTTTTTCATCTTTTGCGGCTGTACATACATGGTCATAGTTTTTGTTGTGATA AAAAGAGACTTAAAAGTTGATTTTTTTCATTGGAGATGCCAATTTCTGTTTTTGGGTCTGGTTCATCATTCAACCCTTAGAAAACAGTAATAAGCAGCTT GTTTAAGGTGTTTCTAGTTCATAAAAGGTTGTATTTGGAGTTGAGAATAATTGATTTTATCTTTATCTGTTTGTTGATTTTGTTGTAGTTTGTAGGGATC ATCATCATTGTGCTGGCTGGTGTGTGGAGTGCAGAACTGTGTGTATAGTGAATGAAAAAACTTGGGTGAAATTGTTTAGGAGTAGTTGATAGATGTCGAA ATCCTTGAGGGTAGTTTGATGAGATGAGGGATGTTATCAGAGTTGATGAAATTTTTGAGGGCCTGCTTTCGGCCGAGCTCGGACAGATACACACGCACAG GTTCGGATGCTGGAGGTAGACAGGATGGACTATTGTGGTACAAAGACTTGGGACAGCATTTTCACGGTGAATTTTCGATGGCTGTGATCCAAGCTAATAA CTTGCTGGAGGATCAGAGTCAGGTTGAATCTGGTACTTTGAGTACCAATGAATTTGGCCCTTATGGTACCTTTGTTGGGGTTTATGATGGGCATGGAGGG CCTGAGACATCACGGTTTATCAATGATCACCTATTTCACCATATCCAGAGATTTACTTCAGAGCAACAATCTATGTCAGTGGATGTAATTCGCAAGGCAT TTCAAGCAACAGAAGACGCATTTATGTCACTCGTTGCCAGACAATGGTCGATGAAGCCGCAAATTGCAGCTGTTGGATCATGCTGTCTTGTTGCTGTTAT TTGTAATGGAACTCTTTATATAGCAAATGCTGGCGATTCCCGAGCTGTTATGGGAAGAGTAGTCAAGGCAACTGGTGAGGTTTTAGCCACACAATTATCA ACAGAGCACAATGCATCAATAGAATCTGTAAGACAGGAGCTGCATTCTTTGCACCCTGATGATCCAAATATTGTTGTTTTAAAGCATAACGTGTGGCGTG TAAAGGGCATTATTCAAGTAAGTCGCCTGCAGCTTATGCTATTAATTCTTTGCTGCTAGATCTTCTATTTATATATCGTAAGTGCCACATGTACATGCAG TAGATAACATCATGACAACCAATTCATTGCTGAAGTCAAAGCATTGATCTCCTAATATCAATTTAATTTTTAGCACTTGTGTGTTGGAATCAACTTTTCA ATCTTTCGGATGTGAAGAATGACTTCAAAAATATAGTATGTGCAGATCTATGCTGTGCAGTAGTAAAAAGGGGTGGGGTAGGTTTATTTTTTGTCGCAAC AAATGTAGGATGTCTGAAAGCTATAAGAGCGGAAAGATTCAAGTTCCCTTGGCTTCATGTAGTTCTATTCTAGCAACTTTTTGTTATAACTTATATGGTG AGAATTTAACTTTGTGATGTTGAATACACATATTAAGATGTTGTCTTACTTGTCTATAATTTTCAGTGAAAGTTGTTGTTTGTAATGCTTCCGTATCTTT CTACTCTTTCATGAAACTTGGACCTTCAGCTTCTCATATTTAGTTTTTGTCTTGATAGCCCCCCCTCTCTTGATTGAATTACATTTTAACCTTTTAAAAT CTTTTACTTGCAGGTTTCTAGATCTATTGGCGATGTATATTTGAAAAAGGCCGAATTCAACAGAGAACCTCTTTATGTTAAGTTTCGACTTCGTGAGCCG TTCAAGAGGCCAATACTGAGCTCAGAACCATCAATAACAGTGCATCAGTTGCAACCACATGATCAATTTGTTATATTAGCATCTGATGGGCTATGGGAGC ACCTCAGCAATCAAGAAGCAGTTGATATAGTTGCAAATAATCCCCACAGTGTAAGATAAAGATTTAAATCAACTATGTTAGATAGCATTATATCATTATC AGTAAGATTAAAACGGATACATTTACGGTTCATCATTTATAATTGAAAGTCGCCATGCTGTTGTTCCTCATGCCTTAAGATATGAACCCCTGCTACATTG TTTTGAGTCTGTTACATTTGGTTGAACAAAAACAGTGAAGCGATCTAAGTCGTTTCTTCTGTAGAATCATGTCAGCATGCAAACTCATTACAGATTGTCA CTTCAAGATATTAATATAGGAAGTAATTCTTCAACATGTAAAAAATATCAATTTTTATAATTGAGAGCTAGTCATTTTTCGATATGAAAATTGTGACATG ATTTTTTTAGCGGTCTTGCAGTATTTAGGTTAAAGAATCTTATTCTTTAATGTTTAAATTATAACCAAAAAAAGCTCGTCTTTACAACTTTGCATAGAGA ACTTTATTCTGGTGTATAAAAATGAAATATGTCTGGGTAAGAAATTAGCATTACATTTAGTATACTTAAATTACTTTTTTGCATGATATAGAAAATATGT TCCAACTAGTGCCTTGAAAAAGCTTAATACCATTTATTTGTTAATGGATATTGCTGGTTCCCAAAGAATTTCATGCAGAAGCATAATAAAAGATAGTTTT ATGCTTTATTATCTATCCTTCTTTCAGGGAAGTGCAAGGAGGCTGGTGAAAGTTGCACTTCAACAAGCAGCAAAGAAGAGAGAAATGAGATATTCAGACT TGAAGAAAATTGATCGCGGAGTTCGTCGACATTTCCACGATGACATCACTGTGATTGTTCTGTATTTTGACTCAAATCTCATGAGTAGGGCAAGCACGGT CAAGTTCCCTAGAGTTTCCGTTAGAGGGGGCGGTATTCACCTGCCTCCGAACACACTGGCACCGTGTACAACACCAACAGAGATTGGTGGTACCTGATCC AACTTGTTATCTTTTTCTTTGATGTATCATTTTCTTGTGTGAATACCAGTTATGTTCAAATAGCAATGAGTGGTGGAGCAGCACTTCAATTCTTTGAATG TGAACTGTAAACTTGCTAGAATACTAATACTCATGTTTAGGTTTTTCCATCTCAAATGAAAAGAACAGAAGATCTTCTGTTAACCATTATAAGAGTTGCT TCAGGCACCATTTTACCCTTGTTCCATTTTTATTTTGGTAAAATTTGTTTCACAACTTGTGACTTAGGATTTTAAGCAATCATGTATGTTTCATTTGCAT GTAACTGCGAGCTTTATTTCTATATACATTCACTTATATTGACTTGAGCGCCG BLAST
Tissuepods
Gene nameLI_gene_177679; 
Additional informationdetails; 

Expression of Ll_transcript_402542

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_402542

BlastpProbable protein phosphatase 2C 60 from Oryza sativa with 72.84% of identity
BlastxProbable protein phosphatase 2C 60 from Oryza sativa with 72.84% of identity
EggnogPhosphatase(COG0631)
KeggLink to kegg annotations (4342084)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019441719.1)
PfamProtein phosphatase 2C (PF00481.20)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;