Ll_transcript_402556

Id TrinityTRINITY_DN50503_c0_g2_i18
Name TranscriptLl_transcript_402556
SequenceGGAGTCTTTCTTTCTCTAGTTTAGTTCTTAAAAGTTATATAAGGTTGTAGCATTAACTTAGCATAGGCATAGTGATAGTGGAGCCCATAGCAGGACCTTG CTTTGCTGGCTTCAAGTTCTTCATTGTTGATCTTTTTATGGGACTTGTCTTCTCATTTCTCAAGAAAAAAAAATAAAGCCTTTTACTTCCTCTAATAATT TTCAACACTAAAGTCTTCATTTTTTTCCTATTATTAATTATTTCATGCACTTCTTCTTCTTCAACTACAATTTCTTCATCTCCAACCCACTTACTACTCA GAAACTATAGGAATAACAAAATCCAAAACCCAAAAAAAAAAAGACTCAACTTTGTTCTTTTCTATTGATTTTGATGGATCCATAGATCTGATAACTTTTC ACACTGTTCTTTTGTTTCCAGATTGTTCATTCCAATAGCTTCCAATCAATAATCAAGTTTGTGGGGTTTGTTGTGGATCATCATCATTGTGGTGTTTGGT GTGAGGAGTTCAGGACTGTATGCATAGTGAATGAGAAAGCTTGGGGTGAAATTGTTTAAGGGTAGTTGATAGATGTGGAATTCCTTGAGGGTAGTTTGGT GAGATGAGGGATGTTATCACAGTTGATGAACTTTTTGAGGGCCTGCTTTCGGCCAAATTCGGTTGGTTCCACACGCACAGGTTCGGATGCTAGAGGTAGA CAAGATGGACTATTGTGGTATAAAGACTCGGGACAGCACTTTCATGGTGAATTTTCAATGGCTGTGGTTCAAGCCAATAACTTGCTGGAGGATCAGAGCC AGGTTGAATCTGGCACTTTGAGTTCCAATGAATTTGGCCCCCATGGTACCTTCATTGGTGTCTATGATGGGCACGGAGGGCCTGAAACATCGCGGTTTAT CAATGATCACCTATTTCACCATCTCAAAAGATTTACTTCAGAGCAACAATCAATGTCAACGGATGTAATTCGCAAGGCATTTCAAGCAACAGAAGACGCA TTTATGTCACTCGTTGCCAGACAATGGTCGATGAAGCCGCAAATTGCAGCTGTTGGATCATGCTGTCTTGTTGCTGTTATTTGTAATGGAACTCTTTATA TAGCAAATGCTGGCGATTCCCGAGCTGTTATGGGAAGAGTAGTCAAGGCAACTGGTGAGGTTTTAGCCACACAATTATCAACAGAGCACAATGCATCAAT AGAATCTGTAAGACAGGAGCTGCATTCTTTGCACCCTGATGATCCAAATATTGTTGTTTTAAAGCATAACGTGTGGCGTGTAAAGGGCATTATTCAAGTA AGTCGCCTGCAGCTTATGCTATTAATTCTTTGCTGCTAGATCTTCTATTTATATATCGTAAGTGCCACATGTACATGCAGTAGATAACATCATGACAACC AATTCATTGCTGAAGTCAAAGCATTGATCTCCTAATATCAATTTAATTTTTAGCACTTGTGTGTTGGAATCAACTTTTCAATCTTTCGGATGTGAAGAAT GACTTCAAAAATATAGTATGTGCAGATCTATGCTGTGCAGTAGTAAAAAGGGGTGGGGTAGGTTTATTTTTTGTCGCAACAAATGTAGGATGTCTGAAAG CTATAAGAGCGGAAAGATTCAAGTTCCCTTGGCTTCATGTAGTTCTATTCTAGCAACTTTTTGTTATAACTTATATGGTGAGAATTTAACTTTGTGATGT TGAATACACATATTAAGATGTTGTCTTACTTGTCTATAATTTTCAGTGAAAGTTGTTGTTTGTAATGCTTCCGTATCTTTCTACTCTTTCATGAAACTTG GACCTTCAGCTTCTCATATTTAGTTTTTGTCTTGATAGCCCCCCCTCTCTTGATTGAATTACATTTTAACCTTTTAAAATCTTTTACTTGCAGGTTTCTA GATCTATTGGCGATGTATATTTGAAAAAGGCCGAATTCAACAGAGAACCTCTTTATGTTAAGTTTCGACTTCGTGAGCCGTTCAAGAGGCCAATACTGAG CTCAGAACCATCAATAACAGTGCATCAGTTGCAACCACATGATCAATTTGTTATATTAGCATCTGATGGGCTATGGGAGCACCTCAGCAATCAAGAAGCA GTTGATATAGTTGCAAATAATCCCCACAGTGTAAGATAAAGATTTAAATCAACTATGTTAGATAGCATTATATCATTATCAGTAAGATTAAAACGGATAC ATTTACGGTTCATCATTTATAATTGAAAGTCGCCATGCTGTTGTTCCTCATGCCTTAAGATATGAACCCCTGCTACATTGTTTTGAGTCTGTTACATTTG GTTGAACAAAAACAGTGAAGCGATCTAAGTCGTTTCTTCTGTAGAATCATGTCAGCATGCAAACTCATTACAGATTGTCACTTCAAGATATTAATATAGG AAGTAATTCTTCAACATGTAAAAAATATCAATTTTTATAATTGAGAGCTAGTCATTTTTCGATATGAAAATTGTGACATGATTTTTTTAGCGGTCTTGCA GTATTTAGGTTAAAGAATCTTATTCTTTAATGTTTAAATTATAACCAAAAAAAGCTCGTCTTTACAACTTTGCATAGAGAACTTTATTCTGGTGTATAAA AATGAAATATGTCTGGGTAAGAAATTAGCATTACATTTAGTATACTTAAATTACTTTTTTGCATGATATAGAAAATATGTTCCAACTAGTGCCTTGAAAA AGCTTAATACCATTTATTTGTTAATGGATATTGCTGGTTCCCAAAGAATTTCATGCAGAAGCATAATAAAAGATAGTTTTATGCTTTATTATCTATCCTT CTTTCAGGGAAGTGCAAGGAGGCTGGTGAAAGTTGCACTTCAACAAGCAGCAAAGAAGAGAGAAATGAGATATTCAGACTTGAAGAAAATTGATCGCGGA GTTCGTCGACATTTCCACGATGACATCACTGTGATTGTTCTGTATTTTGACTCAAATCTCATGAGTAGGGCAAGCACGGTCAAGTTCCCTAGAGTTTCCG TTAGAGGGGGCGGTATTCACCTGCCTCCGAACACACTGGCACCGTGTACAACACCAACAGAGATTGGTGGTACCTGATCCAACTTGTTATCTTTTTCTTT GATGTATCATTTTCTTGTGTGAATACCAGTTATGTTCAAATAGCAATGAGTGGTGGAGCAGCACTTCAATTCTTTGAATGTGAACTGTAAACTTGCTAGA ATACTAATACTCATGTTTAGGTTTTTCCATCTCAAATGAAAAGAACAGAAGATCTTCTGTTAACCATTATAAGAGTTGCTTCAGGCACCATTTTACCCTT GTTCCATTTTTATTTTGGTAAAATTTGTTTCACAACTTGTGACTTAGGATTTTAAGCAATCATGTATGTTTCATTTGCATGTAACTGCGAGCTTTATTTC TATATACATTCACTTATATTGACTTGAGCGCCG BLAST
Tissuepods
Gene nameLI_gene_177679; 
Additional informationdetails; 

Expression of Ll_transcript_402556

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_402556
BlastpProbable protein phosphatase 2C 28 from Oryza sativa with 74.68% of identity
BlastxProbable protein phosphatase 2C 28 from Oryza sativa with 74.68% of identity
EggnogPhosphatase(COG0631)
KeggLink to kegg annotations (4331548)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019452610.1)
PfamProtein phosphatase 2C (PF00481.20)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;