Ll_transcript_402538

Id TrinityTRINITY_DN50503_c0_g2_i9
Name TranscriptLl_transcript_402538
SequenceGGAGTCTTTCTTTCTCTAGTTTAGTTCTTAAAAGTTATATAAGGTTGTAGCATTAACTTAGCATAGGCATAGTGATAGTGGAGCCCATAGCAGGACCTTG CTTTGCTGGATTCAGTTCTCCATTGCTGGTCTTTTTATGGGACTTGTCTCCTCAGTTTTCAAGAAAATAAAATAAACCCTTTTACTTGCTCAATAATTTT CAACACTAAAGTCTTCATTTTTCGTTTTAATTATTCTTTCATGCACATCTTCTTCAATAACAATTTCTACATCTTCATACCACTTGCTACAAAGAAACCA GAGGAATAACAAAATCCAAAACCAACAAAAAAACTTCACTTTGTTATTTTCTATTCATTTTGATGGATCCACAGATCTGATGCTTTCACAAACTTTTCCA CTCACATCTTCTTTTCTTTCTAGATTGTTCTTTCCAGTAGCTTCCAATCAATAGTCAAATTTGTGGGTTTGTAGGGATCATCATCATTGTGCTGGCTGGT GTGTGGAGTGCAGAACTGTGTGTATAGTGAATGAAAAAACTTGGGTGAAATTGTTTAGGAGTAGTTGATAGATGTCGAAATCCTTGAGGGTAGTTTGATG AGATGAGGGATGTTATCAGAGTTGATGAAATTTTTGAGGGCCTGCTTTCGGCCGAGCTCGGACAGATACACACGCACAGGTTCGGATGCTGGAGGTAGAC AGGATGGACTATTGTGGTACAAAGACTTGGGACAGCATTTTCACGGTGAATTTTCGATGGCTGTGATCCAAGCTAATAACTTGCTGGAGGATCAGAGTCA GGTTGAATCTGGTACTTTGAGTACCAATGAATTTGGCCCTTATGGTACCTTTGTTGGGGTTTATGATGGGCATGGAGGGCCTGAGACATCACGGTTTATC AATGATCACCTATTTCACCATATCCAGAGTAAGTTGATAGCTAAATAAGTGAATTCTTTAACCTTTTTTGCATTGGCACAGATTTTCTTGTTTCTTTGTT GTATCCCCCTGCCTTCTTATTCAAAGCCTGCTTTAGCTAATATTGCTTTCTCTTAATAAAAAGCATGCACGGGGATTGTCTTAGATACAGTCAAGGGAAG AAAAGCAGTCATCTAGTTCATTTTTATATGCCAATAAGAGCATAGCTAGTGAGGCTTCATTCTTTTTGGTTCAGTTTTGCCAGAAGCGGTGGTAGTTGAT GGTTCATTGTCCTTCCTAAAAAAAGCATCAGATATATACTGAATTGAGACCACGTAAATTGTGTGTTTGAAGACATTTTTAGTTGCACGTTTCTCTTTTA CGGATTCAACTGTGTTTTGAACCAAATCTCTCCACATGGTTATTGGTTAAACATACTCTTTACCAATTTAAATTTCAGGATTTACTTCAGAGCAACAATC TATGTCAGTGGATGTAATTCGCAAGGCATTTCAAGCAACAGAAGACGCATTTATGTCACTCGTTGCCAGACAATGGTCGATGAAGCCGCAAATTGCAGCT GTTGGATCATGCTGTCTTGTTGCTGTTATTTGTAATGGAACTCTTTATATAGCAAATGCTGGCGATTCCCGAGCTGTTATGGGAAGAGTAGTCAAGGCAA CTGGTGAGGTTTTAGCCACACAATTATCAACAGAGCACAATGCATCAATAGAATCTGTAAGACAGGAGCTGCATTCTTTGCACCCTGATGATCCAAATAT TGTTGTTTTAAAGCATAACGTGTGGCGTGTAAAGGGCATTATTCAAGTTTCTAGATCTATTGGCGATGTATATTTGAAAAAGGCCGAATTCAACAGAGAA CCTCTTTATGTTAAGTTTCGACTTCGTGAGCCGTTCAAGAGGCCAATACTGAGCTCAGAACCATCAATAACAGTGCATCAGTTGCAACCACATGATCAAT TTGTTATATTAGCATCTGATGGGCTATGGGAGCACCTCAGCAATCAAGAAGCAGTTGATATAGTTGCAAATAATCCCCACAGTGTAAGATAAAGATTTAA ATCAACTATGTTAGATAGCATTATATCATTATCAGTAAGATTAAAACGGATACATTTACGGTTCATCATTTATAATTGAAAGTCGCCATGCTGTTGTTCC TCATGCCTTAAGATATGAACCCCTGCTACATTGTTTTGAGTCTGTTACATTTGGTTGAACAAAAACAGTGAAGCGATCTAAGTCGTTTCTTCTGTAGAAT CATGTCAGCATGCAAACTCATTACAGATTGTCACTTCAAGATATTAATATAGGAAGTAATTCTTCAACATGTAAAAAATATCAATTTTTATAATTGAGAG CTAGTCATTTTTCGATATGAAAATTGTGACATGATTTTTTTAGCGGTCTTGCAGTATTTAGGTTAAAGAATCTTATTCTTTAATGTTTAAATTATAACCA AAAAAAGCTCGTCTTTACAACTTTGCATAGAGAACTTTATTCTGGTGTATAAAAATGAAATATGTCTGGGTAAGAAATTAGCATTACATTTAGTATACTT AAATTACTTTTTTGCATGATATAGAAAATATGTTCCAACTAGTGCCTTGAAAAAGCTTAATACCATTTATTTGTTAATGGATATTGCTGGTTCCCAAAGA ATTTCATGCAGAAGCATAATAAAAGATAGTTTTATGCTTTATTATCTATCCTTCTTTCAGGGAAGTGCAAGGAGGCTGGTGAAAGTTGCACTTCAACAAG CAGCAAAGAAGAGAGAAATGAGATATTCAGACTTGAAGAAAATTGACCGCGGAGTTCGTCGACATTTCCATGATGACATCACTGTGATTGTTGTGTATCT TGACTCAAATCTCATGAGTAGGGCCAGCACTGTGAAGTTCCCTAGCATTTCTGTTAGAGGGGGCGGTATTCACTTGCCTTCTAACACACTAGCACCTTGT ACAATGCCAACAGAGATCGGCGGTACCTGATCGAACTTCTTATCGTTTTCTTCGTTGAATCGATTTCTTGTGTGAGTATAGTTATGTTCAAATAGCAATG AGTGGAGCAGCCCTTCAATTCTTTGAATGTGAACTATAAACTTCTTAGGATACTAATACACTCATGTTTAGGTTTTCTCCACTCATATGACCATTATAAG AGTTGCCTCAGGCACCATTTACCTTTTACCATCATTTCCCCTTCTATTTTGGTAACTTCTGTTTTACAAATTGTGATTTGGTATTGTAAGCAATCATCTA TGTTTTATTTGCATGTAACAACTAATGTCTTGATGTGGAAGTTCTTCTTAGTTGTAGATAATTCCGAGCGACAAGGATCTGTTGTCCCAAGCCAATAACG ACTTGTCAC BLAST
Tissuepods
Gene nameLI_gene_177679; 
Additional informationdetails; 

Expression of Ll_transcript_402538

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_402538
BlastpProbable protein phosphatase 2C 28 from Oryza sativa with 79.69% of identity
BlastxProbable protein phosphatase 2C 28 from Oryza sativa with 77.89% of identity
EggnogPhosphatase(COG0631)
KeggLink to kegg annotations (4331548)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019441719.1)
PfamProtein phosphatase 2C (PF00481.20)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;