Id Trinity | TRINITY_DN50506_c1_g5_i3 |
---|---|
Name Transcript | Ll_transcript_403162 |
Sequence | AAATGCATTTCGTTCATTTATGGTACACTATCTATAAGCTGTTAGACACCATTTATTCTGCTTGTTTGTTACAATTTTCAACTAAGTTTATGAATGCAAT GCTTTATTTCGTGTTGCATTTAACAGGGAATAAACTCAGACTTTAGTAGTACTTTGTTATGGAAAGAGAGTAATAGCAAGTAAAAGTAGACAATAACATT TTTAATCTCTCTTGATTGTGACTGCATTTGCAAGATTATGTGTTTTTTGCTCATTTATCCATAATCTACCAAACCAAAATGACTTATTATTCAACACCCT AATCTAGCAGCCTAGCACAAATTCAGCTTAAAGGATTTGCATCTTCTAGTGAGCAATAAACAGCTTATAACAGACTCCTCCACCCCACCCTAACTCTATG CAGGCAAGAAAAACGCCGCATTGTGTAAGGGGAGCAGTGAAGTTTGAGGCTTTTTTTCAAGATCATGCAGATGGAGATCAAACAGCAACTGCACTGAACT ATATACATTCATGGGCCAGAATACAAAATCAAATTAGAGCTCGTAGACTCAGTATGATTGCAGAAGCCAGGATTAAGCAAAAGAAATTGGAAAAACAGCT AAAACTTGAGGCCAAGATTCATGAGCTTGAGGTGGAATGGTGTGGTGGCTCTGAAACAATGGAAGAGATACTTTCCAGGATACATCATAAAGAAGAAGCA GCAGTCAAACGAGAACGAGCCATGGCATATGCCTTCTCTCATCAGTGGAGGCCAAACTATACCCAGTATTTTGGCCAGGCCTCTTACAGCCTTGGCAAAG AGAGCTGGGGATGGAGCTGGAAGGAGAGATGGATTGCAGCCCGACCTTGGGAAGTTCGGGTTCGTGTTCCGGCCCCAATGACAAAGAAACTCAATGACCA CCAGCAGCAGCAAAGGACCAAAGTAGACATGAAATATCACAATGAAACTCTCTTGGCTAAGACTGACTTATCAAACGGGAAGGAGATTGGAAAAGGGAAA GAAAACAACACTCCATAGCTTTCAAATCACAATCCAACCAAATAACTTATGCTGTCAAATTTGTCATCCATGGATAATGCAGAGGCAGAGAATAGAATTT AATGGTCCATGGTTGACAAACCATTTACCTAAAGTGTTTGTTGTAAGGCTACTTTGAGTTGTTGTAATGTTGAAATTTGTGGTTTCTGTTTTGAAATACA TAATGCAGCTGCATTATCATTAAACTATCTATGACTATAATTGGAATATTTCAGGTACATAATTTAATAGAACGGTCCTACTCTCTGTAGTACAGTACCA TATTCATTAATTATTTGTCACACTAAACTTCGTAA BLAST |
Tissue | pods |
Gene name | LI_gene_177698; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_403162
Blastp | Protein IQ-DOMAIN 1 from Arabidopsis with 31.79% of identity |
---|---|
Blastx | Protein IQ-DOMAIN 1 from Arabidopsis with 31.79% of identity |
Eggnog | NA(ENOG411040N) |
Kegg | Link to kegg annotations (AT3G09710) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019449186.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |