Ll_transcript_403004

• Id Trinity: TRINITY_DN50509_c4_g1_i2
• Name Transcript: Ll_transcript_403004
• Sequence: GGATAGAGGAAGTTCTCTCGAATATACCTCTAGGTATTCATTGTTTTTTTCTGTTCTTCTACCTAGTTCAGCATCATTATTACTTTGATAATGATTTAGG AGCATAGGGTTAATCAATATAATCTAGATTTCCTTTCAATTCCTAAATCACTTTGATAATAATATTGAGAAACCGACTTTAAAGGCCATTACGAATTTCT TTCATGTCATTTGGATTAATAAATGTACCATCAACATTTCAAGCACTCGTGAATGAAGTCGTCAAACCTTTTCTTCTAACATGTGTGGTTGCCTTTTTTG ATGATATACCAATCCATGGAGCTACTCTTACAGCATTCACGGCCAGTTCTTCAAGTACTACAGGATAACTAAACCAACTGAAAGTGAACAAAAAGAAGTG TACTTTTGGTCAAAACAGTTTGTAATACTTCGGTCACATACTGGATAAGGGAGTTTCAGCCGATCCTAAGAAGATTGAAGCAATGTGGTTGTGGCCTCCT CGTAAAGGCATCAAAGGGCCGAGGAAGTTTTTGGGATTGACAGATATTATAGAAGGTTTGTGCAAGGGTATGGAAAAATTGCAAAACGTTTGACCCAATT GTTAACGAAGGATAGCTTAAAGTGAAGTGCGGAAGCACAATTGGATTTTGAGGAGCTTAAAGGTGCTTTCACTGAACCTCCAATTGTAGCAGTTCCTGAT TTTACTAATCCTTTTAGGGTGGAAGATGCTTCAAGTAAAGAGTTAAGAGCTGTCCCTTTCGAAGAAGGAAAACCTCTCGCTTTTTGGAGCCATGCTTTAT CGGAGAGAGGTCAACATAACTCAGTTTATGAGAGAGAGCATATAACAGTGGTCCAAGCCCAAAGGTCGAGACATTATTTGAACGAAAACCATTTTATCAT CCTCACTGATAAAAAAAAGTATGAATTTTTAACAGAACAGATTGGCAGAGTATCAACATAAATGGGCTTCAAAATTGATTGTTTATGATTTTGAGATACA ATACCGACCAGGTAAGGAGAATATTGAAGTCTGCAGAAGATGCCTTTTCCAAAAGAACAATGTTTTCAGCAATGACAGTGTTACAATTTGGTAAATAGTG TGAAGGTTCCATCTCAACCAATTGGCAATGAGAGAAAAAGACCAACAAGTATTTAAACAATGCCTAGGAGAATGAAGCAGACAATGGGGACTTGCTTCCC GACATGCTCCCTTCATAGAATGAAATCCTTAGCTAAGGGACCTAATGCTAGGTTGAGTCTGCAGTATTTAAGCCCCTAGCAGATATTGCAGAGGATAGAT CAGGGCGCTTCCAAATTGCAATTACCTGATAGTAATGTATATGTCCTGTCTTCCATGTTTCAATACTCAAGAAAGTTATTCACCCTACTGCAATTCCACA ACCTTTACCATCAATGTTTTCGGATGAACATGTGCCGGAAGTAGTTCCAGAACAACTGTTGAATATAAGACAGACCTTACAGGGTGAGTTAGAAGTGTTG ATCAGGTTGCAGCAGCTCCCTGACCATGAGAATAGGTGGGAACTGGCTAAGAGCATACATGACATATTTCCTACTCATCACCATGAGGACAAGGTGGCTC TTTTACGGGAGAATACTGATAGGATGTGTGGGGAGATATATTAGAGAAGGAAGATGACAGTAGCACAGGATCCTAACTCTATAAATAAAAATTAATAAGA GTTAGTTGGTTGGGATTGGGAGAGAGGAGGTTCTCTCGAATAAATCTCCAGGTATTCATTGTATTTTTCTGTTCTTATACCTACTTATGCATCATGATTT AGGAACTTAGGGTTCATCAATATAAATCTAGTTTTCCTTTCTACTCCTATACTAATTTAC
• Tissue: pods
• Gene name: LI_gene_177716;
• Additional information: -

Expression of Ll_transcript_403004

FPKM

• PAB: 0.3
• PNAB: 0.2
• PS1: 0.2
• PS2: 0
• PS3: 0.1
• PW1: 0.2
• PW2: 0.6
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_403004

• Blastp: -
• Blastx: Retrovirus-related Pol polyprotein from transposon 17.6 from Sophophora with 36.23% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_014630536.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;