Ll_transcript_404135

• Id Trinity: TRINITY_DN50516_c1_g1_i11
• Name Transcript: Ll_transcript_404135
• Sequence: TTCATAGATTTCATTGGATGAGAGATTCTATCAACATAAATCTCCAACCATTTTATTGTTCTCCAAACTTCTTGGTATTCACAAACTCTCGCCTACATGG AAACATCACAACCAAACATCTTCCAAAAAATAACCTTACCACGCCCTGCCACATGTCAAGTTTCAATTAATGTTCATAGATTTCATTGGATGAGAGATTC TATCAACATAAATCTCCAACCATTTTATTGTTCTCCAAACTTCTTGGTATTCACAAAACTTCCTCAAAGTTCAAACCCTTGCTCAAAAAAATGGCTTCAG AATTATCCCTTGTGAAACCCATTTCCAAGTTCACCTATGTCACTCCAAAATTCACCACTCCAACAATGTTTTCATACTCCAAGTTCAGTACCATAAAAAT GTCTGCCACAACAACCTCAACCTCCACAAAACCAAGCAAGAAGAGTAACAAAACTGCAATCAAAGAGACCCTTTTGACACCAAGGTTTTACACCACTGAT TTTGATGAAATGGAGACACTTTTCAACACTGAGATTAACAAGAACCTCAACAATAATGAGTTTGAGGCTTTGCTTCAGGAGTTTAAGACTGATTATAACC AGACACACTTTGTGAGGAACAAGGAGTTTAAGGAAGCTGCTGATAAACTTGATGGCCCTCTTAGACAGATCTTTGTTGAGTTCCTTGAGAGGTCTTGCAC TGCTGAATTCTCTGGTTTTCTTCTCTACAAAGAGCTTGGAAGGAGGCTCAAGAAAACAAATCCTATAGTGGCTCAGATTTTCTCTCTGATGTCTAGAGAT GAAGCCAGGCATGCTGGGTTTCTGAACAAGGGTTTATCTGATTTCAATTTGGCATTGGACTTGGGTTTCTTGACAAAGGCTAGAAAATACACATTTTTCA AGCCAAAATTTATCTTCTATGCTACATATTTGTCTGAGAAAATAGGATACTGGAGATACATAACCATATACAGACATCTCAAGACCAATCCTGAGTACCA ATGTTATCCCATTTTTAAGTACTTTGAGAACTGGTGCCAGGATGAGAACAGGCATGGAGACTTCTTCTCGGCCTTGATGAAAGCACAGCCGCAATTTCTT AATGACTGGAAGGCGAAATTGTGGGCTCGATTCTTCTGTTTATCGGTAATTTTTGGTCCTCGGTTCAATTTGCTTGTCTTCCTTTTAGATTCTTTAAGTT TAAACTGCAATAACTAGCATCAATTGGTACTGAGTTAACAAGATATAAAGCGTATAATATAGATTACTAGAGATAAGTATGAATGTGCTATATACTACAG ATTTGAGGCAATAAAAAACTGGGATGATAAGTATAATAGTATATCCATGATGCAAAAATCTCATCCACTTCGGTGTTCTGCTTAGAGTTATGAATCAATT GATACCAACAAAAGAGACCATAATTGTTCTGTCTTTCATTATAGGTTATGGTCACTATCTTATATAACCTTACTTGAAATATAATAATAACAACAACAAT CAAGCATTAATCCCACAAGTTGGTGGCAGCAACCTTACTTGAAACAATTCTCAAATTTGTCCTGCAGGTTTATGTTACAATGTATCTCAATGATTGCCAA CGTACCGATTTCTATGAAGGCATTGGACTCAACACAAAAGAATTTGACATGCATGTCATCATTGAGGTTAGTTTGTGTTATGCATATTTGCTATAATCAC TATTGACATGTGTAGTCTGTGTTTCAACTAGTTTTCTTTATTGGTGAATTTAACAATTGACTTATAAAATGGAAGAAATCCTGAGCCATTATCTACCATT GAAACACATGACAGATAAGAGCTAATAAACAAAGAACTAGTGAATTACATACAAACAGTTAATCTACCTTATTTCTGGATTGTTTTGCAGACAAACCGCA CAACTGCTCGGATTTTCCCTGCTGTTCTAGACGTTGAGAACCCAGAGTTCAAGCGAAGGTTGGACCGGATGGTGGAGATTAATGAGAAGATTCTTGCTAT CGGAGAAAGTGATGACATTCCGGTGGTGAAGAACTTAAAGAGAATACCACTTATTGCTGCCCTGGTGTCTGAGCTGTTGGCTACATATCTAATGCCTCCA ATTGAGTCAGGATCTGTAGATTTGTCTGAGTTTGAAACACAGCTTGTGTACTGAAAGATGGTTATAAATTCCTTGTTCCTTTTACACCCGATCATAATGT TTATCTTGAGTGGTACTAGTTCTGCTGCTCATGCAAATAATTGTTGTACAATACAGTGAGGAAACATTAACCATGATGAGGTCCTCTTAGTTTTGAAGAT AATTTCTCATATCCAGTGTTCAGTGTTGTAAAAATCGGTTCGTGAACCGATCCCAATATGAGTACGGTATAATAATTATATTGGTCATGCAATCATATCA GTTAAAACTGCCCAAAACCTGTCAAATATATTGGTTATATTGGCC
• Tissue: pods
• Gene name: LI_gene_177768;
• Additional information: details;

Expression of Ll_transcript_404135

FPKM

• PAB: 4.5
• PNAB: 15.7
• PS1: 11
• PS2: 17.9
• PS3: 6.8
• PW1: 14.5
• PW2: 15.5
• PW3: 8.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_404135

• Blastp: Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic from Euphorbia sect. Esula with 88.01% of identity
• Blastx: Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic from Gossypium with 84.27% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458029.1)
• Pfam: Rubrerythrin (PF02915.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;