Ll_transcript_404125

• Id Trinity: TRINITY_DN50516_c1_g1_i3
• Name Transcript: Ll_transcript_404125
• Sequence: CTCAAGGTGTGTGTGCTTTTCATTCTTTATAGTATATTTCAATATGGAACTTGGCATGATTGTTAGTTCTAAGCTTAATTAATGAATTCAAAGGGGAAAT AAGAAATTGTTTTCCTTTTTGATAATCATAGAAGGGTGGGTTTGAGGACTTGGAAAATATAAAAGTGTTTTGGGTAAAAGTTTTCTGTTTTGATTTTCCA ATTTTAATAATAATTGTAATAACATAACCCTTTTTCTTCATTTTTTATGCTTTCAGATGCTTGCATGTAAAAAGTGAAAACAATATTTAATTCAAGAAAC CAAATGAAAATGGTATTTTTGTGATTGTTAACATTCCTTTAACCAAACTAATCCTGAGTCATCTTTTACTCATCGAATGTGTGTAATAGAAGATAATTTT GGAATTTTGGTGTTAAGTAGCAGAACTATGGCCTTATATGGCTTTTGAGTTGTTTAATGTAATTCTATGTTGAAGCTTAAGATGGGTTATGAGAGGCACC ATATATGAGCTGATATATTTGCATAAGAATTTAATTCATGTCTTCTAACAAGCTATCTTGGACAAGATTGTTCTTTATGTTATGCACTTTTGGTTTTTCT ATTCTTGGTGGTCTTATAATTGCTTGGGATGTTGATATTACAGAAAACCAATCCTATAGTGGCTGAGATGTTCTCTCTGATGTCTAGGGATGAAGCCAGG CATGCTGGGTAATAAACACACCCTGTTCCTTTTAATTCTTAATTCTTCTCTTCCATGTTATTTTGTATCTTGTATTTTTCGGTATTACCAAGTATATCCC CTCACCATTTGGGCAATGAATTAATCTTTTTTGAGGTGCGTAACTGCTCTTCCCAACAAGTGTCACTCACACGAATTGAACATTTGACTTATTGGTCATC CTAGGGATCTAGCAGACCCTTATACCATTAGACTAACACCTCGATGTATTTTGTATCTTGTTTGGTAGTGCAAGACCTCACCCTTTTGATTCAATGCAGG TTCCTGAACAAGAGCTTATCTGATTTCAATTTGGCATTGGATTTGGGTTTCCTAACAAAAGCTAGAAAATACACATTTTTCAAGCCGAAATTTATCTTGT ATGCTACATACTTGTCTGAGAAAATTGGATACTGGAGATACATAACCATATACAGACATCTCAAGACCAATCCTGAGTACCAATGCTATCCGATTTTTAA GTTCTTTGAGAACTGGTGTCAGGATGAGAATAGGCATGGAGACTTCATCTCTGCAATGATGAAGGCACACCCAACTTTTCTAAATGACTGGAAGGCAAAG TTATGGTCTCGATTCTTCTGTCTCTCGGTAATTCTTTCATTTGCGTCCAACTTGTTTCTTTCTTTTGGATTCTTTAAGTTGAAAACTGCAATAACTAGTA TCAATTGTTATTAAGTTAACATGATATGTAGAGTATAAGATAGAGTGAAAGAGAAAAGTAGAAATTGCAATATACTACATACCTGAGCTAATAAAGCACA GAGATGATAAGTTTAATAGTATACTTAAGATGCGAAAATCTCGTCCATCTTTGTATTTCACTTAATGAATCGATTTATACGAACAAAAAAGACCACATTT GTTCTGTCTTTCATTATTAGGTTATGGTCATTATCCTACGAAACCTTACATAAAACGTAATTCTCGAATTTGCCTGCAGGTTTATGTTACAATGTATCTC AATGATTGCCAACGCACATCTTTCTATGAAGGCATTGGACTTGACACAAAAGAATTTGACATGCATGTCATCATTGAGACAAACCGCACAGCTGCTCGGC TTTTCCCTGCTGTTCTAGATGTCGAGAACCCAAAGTTCCAGCAGAGGTTGGACAAGATGGTCGAGATTAGTGAGAAGATATCTGCTGTCAACGAGAGCAA TGACATTGAGGTGGTGAAGAACTTGAAGAAGATACCACTTATTGCTAGCCTGGTTTCTGAACTGCTGGCTACGTATCTAATGCCTCCGGTCGAGGCAGGA TCTGTAGATCTCGCCGAGTTTGAACCTAGGCTTGTGTACTGAAGTTGGTTATAAATTCCTTATTCTCTTTTTGTCCAAAATGTTCATCTTCAGTGGTGTA CTAGTATTGTTGCCCATGCAAAACAATATTGTTGTACAAGACAAGGGAACTTCACCATGATGTCTTTCAGTTTTAATGATAATTCATTCCCTTTTACTTA TCAAAAA
• Tissue: pods
• Gene name: LI_gene_177768;
• Additional information: details;

Expression of Ll_transcript_404125

FPKM

• PAB: 2.5
• PNAB: 5.8
• PS1: 3.7
• PS2: 6.3
• PS3: 2.4
• PW1: 2
• PW2: 1
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_404125

• Blastp: Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic from Gossypium with 81.03% of identity
• Blastx: Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic from Gossypium with 89.38% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456731.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;