| Id Trinity | TRINITY_DN50516_c1_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_404126 |
| Sequence | GTTTATGAATGTCTACAAGGTGGAGTTGATTCTACCAAATTTGATGAAAATGTGATTTCTCCCAAAAAAAAATCCACAAATTCTAACATACATGGAATGA TTATTTACAACCAAATGAACCAATCATTTAACAAAGTAACCTTCACGTGTCAAATTTCAATTAATGTTCATAGATTTCATTGGATGAGATTCTATCAATA TAACTCTCTAACCATGTTATAGTTTTCTTCACTTCTTGTCCTAAACACTCCTCCTCACACCACAACCTCAAAGTTCACACCTTTGCTAAAAAAAATGGCT GCAGAGATGGCCCTTTTGAAACCCATTTCCAAGTTCAGCAATGACACTCCAAAATTCAGCACTCCTAGAATGTTTTCATACCCCAAATTCAGTACCATAA AAATGTCTGCTACAACAACCTCAACCTCCACAAAACCAAGCAAGAAGGGTAACAAAACTGCAATCAAGGAGACCCTTTTGACACCAAGGTTTTACACCAC TGACTTTGATGAGATGGAGACACTTTTCAACACTGAGATCAACAAGAACCTCAACAATGATGAGTTTGAGGCACTACTTCAGGAGTTCAAGACTGATTAT AACCAGACACACTTTGTGAGGAACAATGAGTTCAAGGAAGCTGCTGATAAACTTGATGGTCCTCTTAGGCAGATATTTGTGGAGTTCCTTGAGAGGTCTT GTACTGCTGAATTCTCTGGTTTCCTTCTATATAAAGAGCTTGGAAGGAGGCTCAAGAAAACCAATCCTGTGGTGGCTGAGATTTTCTCTCTCATGTCTAG GGATGAAGCCAGGCATGCTGGGTTTCTGAACAAGGGCTTATCTGATTTCAACTTGGCATTGGACTTAGGCTTCCTAACAAAAGCTAGAAAATACACATTT TTCAAGCCGAAATTTATCTTGTATGCTACATACTTGTCTGAGAAAATTGGATACTGGAGATACATAACCATATACAGACATCTCAAGACCAATCCTGAGT ACCAATGCTATCCGATTTTTAAGTTCTTTGAGAACTGGTGTCAGGATGAGAATAGGCATGGAGACTTCATCTCTGCAATGATGAAGGCACACCCAACTTT TCTAAATGACTGGAAGGCAAAGTTATGGTCTCGATTCTTCTGTCTCTCGGTAATTCTTTCATTTGCGTCCAACTTGTTTCTTTCTTTTGGATTCTTTAAG TTGAAAACTGCAATAACTAGTATCAATTGTTATTAAGTTAACATGATATGTAGAGTATAAGATAGAGTGAAAGAGAAAAGTAGAAATTGCAATATACTAC ATACCTGAGCTAATAAAGCACAGAGATGATAAGTTTAATAGTATACTTAAGATGCGAAAATCTCGTCCATCTTTGTATTTCACTTAATGAATCGATTTAT ACGAACAAAAAAGACCACATTTGTTCTGTCTTTCATTATTAGGTTATGGTCATTATCCTACGAAACCTTACATAAAACGTAATTCTCGAATTTGCCTGCA GGTTTATGTTACAATGTATCTCAATGATTGCCAACGCACATCTTTCTATGAAGGCATTGGACTTGACACAAAAGAATTTGACATGCATGTCATCATTGAG GTTAGTTTGTGTTTTGCATATTTGGCTATTTTCTATAATCACCATTGGCATGATTAATATGTGTAGTTTGTGTTTCTACTAATTTTCATTATTGTTGAAT TTAACTATTGGTTTATGAAATGGAAGAAATCTTGAGGCATAAGTTACCATTAGAAAACATGACAAATAAGAACTAATAAAGAAAGAACTCATGAGTTACA AACAGTTAATCTACCTTATACCTGGATACTGGATTGTTTTGCAGACAAACCGCACAGCTGCTCGGCTTTTCCCTGCTGTTCTAGATGTCGAGAACCCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_177768; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_404126
| Blastp | Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic from Euphorbia sect. Esula with 84.62% of identity |
|---|---|
| Blastx | Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic from Gossypium with 82.75% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456731.1) |
| Pfam | Rubrerythrin (PF02915.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |