Ll_transcript_404130

• Id Trinity: TRINITY_DN50516_c1_g1_i7
• Name Transcript: Ll_transcript_404130
• Sequence: ATACTCCAAGTTCAGTACCATAAGAATGTCTGCCACAACAACCTCCACCTCCACAAAACCAAGCAAGAAGAGTAACAAAACTGCAATCAAAGAGACCCTT TTGACACCAAGGTTTTACACCACTGATTTTGATGAAATGGAGACACTTTTCAACACTGAGATTAACAAGAACCTCAACAATAATGAGTTTGAGGCTTTGC TTCAGGAGTTTAAGACTGATTATAACCAGACACACTTTGTGAGGAACAAGGAGTTTAAGGAAGCTGCTGATAAACTTGATGGCCCTCTTAGACAGATCTT TGTTGAGTTCCTTGAGAGGTCTTGCACTGCTGAATTCTCTGGTTTTCTTCTCTACAAAGAGCTTGGAAGGAGGCTCAAGGTGTGTGCTTTTGTTTTTTTA TGGTTTGTTTTCGAGTTGAGTTTTGGAGGGGAATGAAGAGAAATGGAAGGCTTTAGAGCCATCTCAATAGTGTATTTGATGGCTTGCGAGTCTTCATTTT CTTCCCTCCAAAATTCAGCTCGTAAACAAACTTTTAGATTTTAATTCATCATTGACCTTAGCATGATAGTTAATTGTGGACAATTAATTCAAATGGAGAA ATAAGGAAATTCTTTTCTTAGAGAAGTGTCAAAAGAAAAGGCTTTGGGACTTGGAAAACATAAGGGACTGTTTAGTTTAGGGAAGCTTTTCCTATTTACA ATTCTTGTTTTCATTAATAATTACAATATTTTATCTTGTTTTAGCTTTCAAATATTTATACAAGAGGGAAAGTAATATTCTTTTTACTGGTTCTCATACA AATATTTGAAAACATGTCAAAATAAGGTGAAATTGTTGTTCTTTTGTAATAATTTTTTTCTTTAACTAAATACATCCTAAGTCACCATTTGAACAATTTT TTGTTCTTATTTTCTTAATACAGGTTTCTGTACTATGACTCTGGTCTTATATGATTTGTTAGTTGTTCAATCATTAATGTAACTCTATGGTGAATCCTAA GATGGCTTAACTCTGAGCTGCTATACTTGTATATGAGAATTTAATTTATGTCTTCTGACAAGCTATATTGGACAAGATTGTTCTATATGTACTTCTGGTG TTTCAATTCTTGGCCTGATTAATTGCATGGGATGTTTATATTACAGAAAACAAATCCTATAGTGGCTCAGATTTTCTCTCTGATGTCTAGAGATGAAGCC AGGCATGCTGGGTAGTAGACACACCTTGTGCCTTTTAGTTCTTAATTCTCTTCCATTTTCTATTCAGTATCTTGTTTTGTGGTTCATAACCTCATCCATT TGATTCTATTCAGGTTTCTGAACAAGGGTTTATCTGATTTCAATTTGGCATTGGACTTGGGTTTCTTGACAAAGGCTAGAAAATACACATTTTTCAAGCC AAAATTTATCTTCTATGCTACATACTTGTCTGAGAAAATTGGATACTGGAGATACATAACCATATACAGACATCTCAAGACCAATCCTGAGTACCAATGC TATCCGATTTTTAAGTTCTTTGAGAACTGGTGTCAGGATGAGAATAGGCATGGAGACTTCATCTCTGCAATGATGAAGGCACACCCAACTTTTCTAAATG ACTGGAAGGCAAAGTTATGGTCTCGATTCTTCTGTCTCTCGGTTTATGTTACAATGTATCTCAATGATTGCCAACGCACATCTTTCTATGAAGGCATTGG ACTTGACACAAAAGAATTTGACATGCATGTCATCATTGAGACAAACCGCACAGCTGCTCGGCTTTTCCCTGCTGTTCTAGATGTCGAGAACCCAAAGTTC CAGCAGAGGTTGGACAAGATGGTCGAGATTAGTGAGAAGATATCTGCTGTCAACGAGAGCAATGACATTGAGGTGGTGAAGAACTTGAAGAAGATACCAC TTATTGCTAGCCTGGTTTCTGAACTGCTGGCTACGTATCTAATGCCTCCGGTCGAGGCAGGATCTGTAGATCTCGCCGAGTTTGAACCTAGGCTTGTGTA CTGAAGTTGGTTATAAATTCCTTATTCTCTTTTTGTCCAAAATGTTCATCTTCAGTGGTGTACTAGTATTGTTGCCCATGCAAAACAATATTGTTGTACA AGACAAGGGAACTTCACCATGATGTCTTTCAGTTTTAATGATAATTCATTCCCTTTTACTTATCAAAAA
• Tissue: pods
• Gene name: LI_gene_177768;
• Additional information: details;

Expression of Ll_transcript_404130

FPKM

• PAB: 10.1
• PNAB: 22
• PS1: 13.6
• PS2: 22.4
• PS3: 13.9
• PW1: 7.5
• PW2: 3.9
• PW3: 2.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_404130

• Blastp: Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic from Euphorbia sect. Esula with 87.7% of identity
• Blastx: Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic from Gossypium with 77% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456731.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;