Ll_transcript_404874

Id TrinityTRINITY_DN50519_c0_g1_i2
Name TranscriptLl_transcript_404874
SequenceCGGGTATAGATGATTATGAAATAACTAACTGTGTTTCATGACAAATATATTGGCAGTGTTCATCTTATTTGGGAAGGCGTCCTGTCACTCCAGAAACCAT CTCGTTTCTGGACACTGATCCAGACATTTTCGCAGCTTCGGATTCCTTTGGACCCGCGGCTCCAATCTATCGCCATATTCAAGATCCTTCATCTGATGAT TCATCTGATGGTTTTACTGAGGTAGGCTCGTGCTCTAAAACCCTTTTCGTGTGTTCACATTTTGCTTACTGTTAAGTACTATATACTTAACCGGGTCTTT TGTGTTTTATGGTGTAGTTGCCATTTCAGTCATGCTCTATTATTATCATATCCTTTCTCTTATGTCTTGGTAATAAATGAATGGAGAGGTTTTACTTTAT TTAGATTATAATGACATTGATGCACCACCCCTGCTAGTTTACAGAGTATAATACTTACTACTCAGCTTAACATTGTTAAAGTTCTAATAAATGTATTATG AAAGACGTTGTTTCATATATTGTACTGATTGAAGTGTGTTTTTGGACATGTTTGGCAAAAGTGATGGTATATTTCACCCAAAATTTAAGGAGGTAGTTAG TTTTGCATTTTAAATGTCTTGCATTATTCATTGTTTAAAGGAACTGGTTAAATTTCACAATGAAAGTGTAAGTATATAGAAACATTATGTGGCAATTCAT TGGAATATTGGCCAGAATGCTCACGGACTATGTGGTGTTATTTCGGCTTCGGTGTCTCTGGCAATGTATCGCTGGTGAAAGAGTCCCAGCAACCCATTTT TGTGAAAAAGATCAGTGAAAGTGCGGAGTGAAGAGGAGTGAGAACCAGATGTGAACATTGGCTTCATAAATCAAGTTGCCAATTTCGTAATAACCAGTTT AGTTCATAACTGCTTGACGAAATGTAGAGTTCTGTTTTCTAATTAAAAGGTGGCCCAATGCATGAGGCTGCCACCTAGTGGGGTACGGGGAGGGTAAATG TATGCTGGCTTACACTTGCAATCGAAGAGTTGTTTCCAAGATTTGAACGCATGACCTCCTCGGTCACAAGGCAAACAACCTTACAATTGCACCGACTATC ACTCTCGGAACTTCAGTTTTCTAATTACCATCTAAAAATCCCCTTTCCAAAAACTGTGCGGTTTGAGAATCAGTTCTAAAAATTGGTTTGACTCCATTTT GGTTTATGAACCATGCCAAGCCATGAACAACCCTAATTATATCCACTTTTGCCTTGGTTTAAATTCTATAGCAGTCGAGCTAATATCGCATTTCTTGATT GTTGTTGCTGTCATTTTGAAGATTTTGCTTCAAGGTGGTCTACTAATGGGGGGACGATTAACTAGGCACGACCGGTTCCGACGCTTGAGACTTGATATTG ATAACATGTCATATGAGCAATTGCTTGATCTCGGTGAAAGAATCGGTTATGTGAACGCTGGACTTAAAGAAGATGAGATGGGACGCAACATAAGGAAGAC TAAGTTTAAATTTTCACACGATGCATCAAAGAATCAAGTAGATAGAAAGTGCACCATTTGTCAGGTTAGATTGTAAAATCGAACCAAAATTCTTATTTTC TCATCTCATTGCTTTTCTTCCTCATACCGGATTATGTGTTGCTGTTAGGTTTTTAAGATATGTTTAAATGATTAGAATATAAATTGTTTTGATTCTGTGA GCACAGGAAGAGTATGAAGCAGATGATGAACTGGGGAAGCTGAATTGCAAACATAGCTATCATGTTCGGTGTATAAAACAATGGGTTGCGCAGAAAAATT TCTGTCCAGTTTGCAAGCAACAAGTCATGGCTCGACACTGAGTGTCACAATCCTGATGTGTTTTTTGGGACTACTTATTCTCATCCTTACGTTGGTGCAT AGATTTTCAGATAAAATACAAGTTTAAGATTTTTTCGGTTTTTGCTATGTTTTTCTCAGCCTCCTTTGCTAGGAATCTGGAACACATGTTATTGGGTAAA GGTTTCATAATTGGATGAGAACTTGGCATATTATAAACATGAGTTGGCCTTGCCTTTGAGCAAGTAATCATTTTTATGTAGTTTGTGGTAGTGTTTATAT TTCTGATGCTTATCATCTGCCCCCATTTCGTGTTTATGCTAATTGTCTGTGTTGCAAAAACTCAGCTTGAGCATTAAGAACACCCCATTAAGGAGCAAGG TCCATACCCGATCTCAAAGATGAGGTTCTCACCTCATGATGCATGGGGATGAGAGTACATCTGCTGTCCTACATGTTGTGCCATGTTGTGCCACTGGATG TACCACGAGTCCATGATTGGTTGAAAAATATATTTTAAACTAAAAAATTAATAATTAATTATGTTTCTGACCAATTACAGTTTATGGCACATGCAGTGGT ACAACTTGT BLAST
Tissuepods
Gene nameLI_gene_177782; 
Additional informationdetails; 

Expression of Ll_transcript_404874

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_404874
BlastpProbable E3 ubiquitin-protein ligase HIP1 from Oryza sativa with 47.89% of identity
BlastxE3 ubiquitin-protein ligase MBR2 from Arabidopsis with 48.84% of identity
Eggnogzinc ion binding(ENOG41121N2)
KeggLink to kegg annotations (9272591)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019421953.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;