| Id Trinity | TRINITY_DN50519_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_404902 |
| Sequence | AAGTTTGTTCCATAATCAACAATTAAAGACTTCAACACTTCAACATCTCTCTAAACACTTCAACACTTCAAAATCACTGTGAACACTTTAAAATCTCTCT ACTTTCCTCACACACTTTCTCTATTTAGTTTCTCTCTCTTAATATGCCTGTTATCACAGAAGCAACAACAAAAGTAGTGGCAGAAAACATGAAATGGAGA AAACCCAGAAACCAAATCAACATTACAGAAACAGATCCAAACCCACAAAACCCTTCACTAACCCAAATCACAACTTGCAAATCCACCATTTCCTCTCTCT TACTCTCAACTTTCTCCAACACCAACAACAATGAAAACACCAGCAACAGAAACCACCACCATAGCAAGAAAAAAACAAACTTTTCTGCTGCAGCAACCTT CAGGGGCTTGGGCTGCACCGCCGGAGCACCGCAAGAGGTGTCGGTGCCGGCTATGATCCGAAGCTCAGCTGATTGGGAAGTGAATAACAAGAAAGGAAGA AAAAAGAAGCACAAGAGTACCAAGAACAGTAACAATGTTATTATTCCAGAAGGTTCTAATTCTAATAATAATAATAATCTTAGCTATGTGGATTTTCAAG ATGTTTGGTGTGGCCCTGGAATTGGGTTTTCAACTGATGCAGCATCTGTTGATTATGTTGTTCCAAAGAAGAATGTGTCTTCAAGAGGGAAAATTGATGT TGAGAAGATAACTCACAGAGAGTGTTCATCTTATTTGGGAAGGCGTCCTGTCACTCCAGAAACCATCTCGTTTCTGGACACTGATCCAGACATTTTCGCA GCTTCGGATTCCTTTGGACCCGCGGCTCCAATCTATCGCCATATTCAAGATCCTTCATCTGATGATTCATCTGATGGTTTTACTGAGGTAGGCTCGTGCT CTAAAACCCTTTTCGTGTGTTCACATTTTGCTTACTGTTAAGTACTATATACTTAACCGGGTCTTTTGTGTTTTATGGTGTAGTTGCCATTTCAGTCATG CTCTATTATTATCATATCCTTTCTCTTATGTCTTGGTAATAAATGAATGGAGAGGTTTTACTTTATTTAGATTATAATGACATTGATGCACCACCCCTGC TAGTTTACAGAGTATAATACTTACTACTCAGCTTAACATTGTTAAAGTTCTAATAAATGTATTATGAAAGACGTTGTTTCATATATTGTACTGATTGAAG TGTGTTTTTGGACATGTTTGGCAAAAGTGATGGTATATTTCACCCAAAATTTAAGGAGGTAGTTAGTTTTGCATTTTAAATGTCTTGCATTATTCATTGT TTAAAGGAACTGGTTAAATTTCACAATGAAAGTGTAAGTATATAGAAACATTATGTGGCAATTCATTGGAATATTGGCCAGAATGCTCACGGACTATGTG GTGTTATTTCGGCTTCGGTGTCTCTGGCAATGTATCGCTGGTGAAAGAGTCCCAGCAACCCATTTTTGTGAAAAAGATCAGTGAAAGTGCGGAGTGAAGA GGAGTGAGAACCAGATGTGAACATTGGCTTCATAAATCAAGTTGCCAATTTCGTAATAACCAGTTTAGTTCATAACTGCTTGACGAAATGTAGAGTTCTG TTTTCTAATTAAAAGGTGGCCCAATGCATGAGGCTGCCACCTAGTGGGGTACGGGGAGGGTAAATGTATGCTGGCTTACACTTGCAATCGAAGAGTTGTT TCCAAGATTTGAACGCATGACCTCCTCGGTCACAAGGCAAACAACCTTACAATTGCACCGACTATCACTCTCGGAACTTCAGTTTTCTAATTACCATCTA AAAATCCCCTTTCCAAAAACTGTGCGGTTTGAGAATCAGTTCTAAAAATTGGTTTGACTCCATTTTGGTTTATGAACCATGCCAAGCCATGAACAACCCT AATTATATCCACTTTTGCCTTGGTTTAAATTCTATAGCAGTCGAGCTAATATCGCATTTCTTGATTGTTGTTGCTGTCATTTTGAAGATTTTGCTTCAAG GTGGTCTACTAATGGGGGGACGATTAACTAGGCACGACCGGTTCCGACGCTTGAGACTTGATATTGATAACATGTCATATGAGCAATTGCTTGATCTCGG TGAAAGAATCGGTTATGTGAACGCTGGACTTAAAGAAGATGAGATGGGACGCAACATAAGGAAGACTAAGTTTAAATTTTCACACGATGCATCAAAGAAT CAAGTAGATAGAAAGTGCACCATTTGTCAGGTTAGATTGTAAAATCGAACCAAAATTCTTATTTTCTCATCTCATTGCTTTTCTTCCTCATACCGGATTA TGTGTTGCTGTTAGGTTTTTAAGATATGTTTAAATGATTAGAATATAAATTGTTTTGATTCTGTGAGCACAGGAAGAGTATGAAGCAGATGATGAACTGG GGAAGCTGAATTGCAAACATAGCTATCATGTTCGGTGTATAAAACAATGGGTTGCGCAGAAAAATTTCTGTCCAGTTTGCAAGCAACAAGTCATGGCTCG ACACTGAGTGTCACAATCCTGATGTGTTTTTTGGGACTACTTATTCTCATCCTTACGTTGGTGCATAGATTTTCAGATAAAATACAAGTTTAAGATTTTT TCGGTTTTTGCTATGTTTTTCTCAGCCTCCTTTGCTAGGAATCTGGAACACATGTTATTGGGTAAAGGTTTCATAATTGGATGAGAACTTGGCATATTAT AAACATGAGTTGGCCTTGCCTTTGAGCAAGTAATCATTTTTATGTAGTTTGTGGTAGTGTTTATATTTCTGATGCTTATCATCTGCCCCCATTTCGTGTT TATGCTAATTGTCTGTGTTGCAAAAACTCAGCTTGAGCATTAAGAACACCCCATTAAGGAGCAAGGTCCATACCCGATCTCAAAGATGAGGTTCTCACCT CATGATGCATGGGGATGAGAGTACATCTGCTGTCCTACATGTTGTGCCATGTTGTGCCACTGGATGTACCACGAGTCCATGATTGGTTGAAAAATATATT TTAAACTAAAAAATTAATAATTAATTATGTTTCTGACCAATTACAGTTTATGGCACATGCAGTGGTACAACTTGT BLAST |
| Tissue | pods |
| Gene name | LI_gene_177782; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_404902
| Blastp | - |
|---|---|
| Blastx | E3 ubiquitin-protein ligase MBR2 from Arabidopsis with 48.84% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421953.1) |
| Pfam | - |
| Rfam | - |
| GO | - |