Ll_transcript_404921

• Id Trinity: TRINITY_DN50519_c0_g4_i12
• Name Transcript: Ll_transcript_404921
• Sequence: ATACTTCTGCTACATGTGTGGATTTTCAAGATATTTGGTGTGGCCCTGGAATTGGGTTCTCAGTTGATACTGCTGTTGCTAACTCCTATGTGGATTGTGT TGTGGCAATGAAGAATGTATCTGCAAGAAGGAATCTTGATGTAGAGAAGATAACACACAGGGAGCATCTATCTTATTTGAGAAGGAACACTATAAACACA GAAAGTATCTCAATTCTTGATGAATATTCAGACATATTTACACCACGCCCTGGCTTAGAGTCTTTTACTACTTCCAGATACTATCCTCGTGTTCTGCATC CTTCCTCTCATGGTCTTGCTAAGATAATGATACTTCAAGGAAGACTATTAATGGAGGAACAATTGAATTCACATGACCAATTTAGAGACTGGAGACTTGA TGTTGATAACATGTCATATGAGCAACTTCTTGAGCTGGGTGAGAAAATTGGTTATGTGAACACTGGACGTGAAGAGGATGAGATGAGACTCAACATAAGG AAACTTAAGTTTGTAATTTCAAAT
• Tissue: pods
• Gene name: LI_gene_177788;
• Additional information: details;

Expression of Ll_transcript_404921

FPKM

• PAB: 77
• PNAB: 11.4
• PS1: 1.2
• PS2: 0.9
• PS3: 1.3
• PW1: 6.2
• PW2: 8.3
• PW3: 5.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_404921

• Blastp: Probable E3 ubiquitin-protein ligase RHG1A from Arabidopsis with 49.25% of identity
• Blastx: Probable E3 ubiquitin-protein ligase RHG1A from Arabidopsis with 49.25% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: Link to kegg annotations (AT5G42940)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443280.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;