| Id Trinity | TRINITY_DN50519_c0_g4_i3 |
|---|---|
| Name Transcript | Ll_transcript_404882 |
| Sequence | ATACTTCTGCTACATGTGTGGATTTTCAAGATATTTGGTGTGGCCCTGGAATTGGGTTCTCAGTTGATACTGCTGTTGCTAACTCCTATGTGGATTGTGT TGTGGCAATGAAGAATGTATCTGCAAGAAGGAATCTTGATGTAGAGAAGATAACACACAGGGAGCATCTATCTTATTTGAGAAGGAACACTATAAACACA GAAAGTATCTCAATTCTTGATGAATATTCAGACATATTTACACCACGCCCTGGCTTAGAGTCTTTTACTACTTCCAGATACTATCCTCGTGTTCTGCATC CTTCCTCTCATGGTCTTGCTAAGGTTGGTTCATCCTCTTATACTCTATTTATAGTTACACCGTCCGCGGTACCAATTCTAGTGTGTAGTTACCGATTCTA TGTGGTTCTTTAGTTTTTACATTAATTATTACAAGACTCCGATTATGAAGAATTTGATGTGGAACTCGATACTAAAGTAAGGAAACTATGTAACTATGAT CATGGTTTGATTTATAGAAATTGTTAGGATATAAGGAATTGTTAGTTAGTTAGTCAGAAATGTTTTGGTTAGTTGGTAAGTAGAGAAAACACAAGAAAAA AAGTAGTTCAATACCCCATACTCTCACTTAGCGGGTATAAGGAGAGTGGATATATGCAAACTTATCTCTCAATTGAAGAAATTGTTTCCAAGATTTGAAC ATATGACTTTATAGTCACCAAGCAACAATCTTACCGTTACGCCAATCTAATATAACAACTCTACCTTGTTAGCGCAACTTTTGATTTATTATATAATGAG AACAAGCACATACATTTCTTGATATCATTGTGTTATAAGTATAATACATCAAATCTTGGCTTTGATCTTATTGTTTTTGAGAGCTGATATTGTACATCTT GATTGTGCTGGCTCTTTGAAGATAATGATACTTCAAGGAAGACTATTAATGGAGGAACAATTGAATTCACATGACCAATTTAGAGACTGGAGACTTGATG TTGATAACATGTCATATGAGCAACTTCTTGAGCTGGGTGAGAAAATTGGTTATGTGAACACTGGACTTGAAGAGGATGAGATGAGACTCAACATAAGGAA ACTTAAGTTTGTAATTTCAAATGGTATATCAAAGAATCAAATGGACAAAAAGTGCACCATTTGTCAACAGGAGTATGAAGGAGGTGAAGAGTTAGGGAGG CTAAATTGTGAACACAAGTATCACTTTCAGTGTATAAAAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_177788; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_404882
| Blastp | E3 ubiquitin-protein ligase MBR2 from Arabidopsis with 46.46% of identity |
|---|---|
| Blastx | E3 ubiquitin-protein ligase MBR2 from Arabidopsis with 40.44% of identity |
| Eggnog | zinc ion binding(ENOG41121N2) |
| Kegg | Link to kegg annotations (AT4G34040) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443281.1) |
| Pfam | RING-like zinc finger (PF17123.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |