Ll_transcript_404877

• Id Trinity: TRINITY_DN50519_c0_g5_i1
• Name Transcript: Ll_transcript_404877
• Sequence: GTAACATTGTAATAGAGAAGAGTAGTTACTACTAGCTAGGCTTTTGTGCAAGAGACAGAGTTCACCCAAACACTTCAATTAAATATGGCTTTGTCAGCCA TTGAGAGCTTCAAAGTTGAGGATCATGTACTGGTAGACACTGAGAAGAACACTATCCAAGAACATTCTGAAACTTCTAAGTGGGTTCTCAGTGCTCCTGA TCCTCCAACTTTGTGGCATCAGATTGTGGTTTCTGTGAGGAACACCATTTCACACTATCAACAATGGTGCTCCTCTCTTAGAGGCCAACATAGAGCCAAA GTTATGCTCTCATTCCTGACTGCCATTTTTCCTATCCTTGATTGGAGCCACAGTTATACTGTAACCAAATTCAGGAATGATTTACTTGCAGGCCTAACTA TTGCTAGCCTCTGCATCCCTCAGAGCATTGGCTATGCTACTTTAGCAAAGCTTGATCCTGAATATGGTCTTTATACAAGTGTGGTACCACCTCTTATCTA CGCTGTAATGGGAACGTCAAGAGAAATAGCAATTGGACCTGTGGCAGTGGTATCTCTTCTTTTGTCATCAATGATTCAGAAATTAATAGACCCTGTTGCT GATCCCATTGGTTACAGAAAGTTTGTTTTTACTGCAACTCTCTTTGCTGGTATATTTCAAGCTGCTTTTGGACTCTTAAGGTTGGGATTCTTTGTGGATT TTCTGTCCCATGCTGCTATTGTTGGGTTCATGGCAGGAGCAGCTATAATAATTGGTCTTCAACAGCTGAAGGGACTGTTTGGGATCAATCATTTTACCAA CCACACTGACATAATCTCTGTCATGAAATCTGTTTGGGAATCAGTTCATCATCCGTGGAACCCGCGAAATTTTGTCCTGGGATGTTCATTCTTCATTTTC ATTCTACTTACAAGACTTCTGGGTAAAAGGAACAGAAAACTGTATTGGTTGCCAGCAATATCTCCTCTTATATCAGTGATACTAGCAACAGTTATTGTTT TTGTGACAAGAGCTGACAAAAGTGGAGTCAATATTGTCAAACATATAAAAGGAGGACTAAATCCAATTTCTATGGATCAGATTGAGTTGAATAGCCCCCA TGTTGGAGCATTGGCCAAAATTGGACTAGTTGTTGCTATAGTTGCACTTACTGAATCGGTTTCTGTTGGACGATCTTTTGCGTCGTTGAAAGGATATCAC CTTGATGGAAACAAGGAAATGGTGTCATTAGGCTTCATGAACATCATAGGATCCTTCACTTCTTGTTATGTTGCAACTGGTTCTTTCTCCCGCACAGTGG TTAATTTCACTGCTGGATGTGAAACATTAATGTCAAACATAGTGATGGCAGTTACAGTCATTATATCACTACTTTGTCTCACAAAGTTATTGTATTTTAC CCCAACTGCAATTCTTGCTTCAATAATCCTTTCAGCTTTGCCAGGACTAATAGACATAAATGAAGGTTACAAAATATGGAAAACTGATAAGGTTGACTTT CTTGCTTGCATTGGAGCCTTCTTTGGAGTTATGTTTGTGTCAGTGGAGATTGGTCTACTAGTGGCAGTGGCCATATCTTTTATGAAGATAATTATGTTGT CTATTGGACCTGGCATAGAAACTTTGGGAAAACTTCCAGGCACAAATATGTTCTGTGATGTTCATCAATATCCTATGGCTATTAAGATTCCTGGGGTTGC AATAGTACGCATCAAGTCTTCCATGCTTTGTTTTTCTAATGCCAATTCTATTACAGAAAGGGTCACTAAATGGATCACTGAGGAAGAAGCAGAAGGGAAA AGAAGCATAATCCAGCTTGTAATCATTGATGCATCTAATTTGGTGAGTATTGACACTTCAGGAATTGCTTCTCTTGAGAAACTGCATAAGAATTTGGTCT CAAGTGGGAAGCAGTTAGCCATTGCCAACCCAAGGTGGAAAGTTATTTACAAGCTGAAGACAACCAATTTTGTGAAAAGAATTGGAGGAAGGGTCTTTTT AACTGTTGGAGAAGCTGTTGAATCCAAGCTGGATTTCTAAGTTGAAATCTGATGGCTACTAATAATTGAACCCTGTGTGTCTGTTTGTAGAAGTTGTGTG TGGGAATAAAATCTTAGATTTTTCATGTCTGGTCTTAATTAGAATGTTGTACTATATCAATCATATTAGTGTTTGGATTTTGCAGTCTCTGGGTACTTTA TGTACTATAATACAATGGGACATAATGTATTTATTATATTGGTGTTGGTGTGTAACTTTTATGTAATAAAAGAAGTGTTTGATTTGTG
• Tissue: pods
• Gene name: LI_gene_177789;
• Additional information: details;

Expression of Ll_transcript_404877

FPKM

• PAB: 0.7
• PNAB: 0.5
• PS1: 0.4
• PS2: 2
• PS3: 0.4
• PW1: 7.8
• PW2: 6
• PW3: 0.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_404877

• Blastp: Sulfate transporter 2.1 from Arabidopsis with 63.91% of identity
• Blastx: Sulfate transporter 2.1 from Arabidopsis with 63.91% of identity
• Eggnog: sulfate transporter(COG0659)
• Kegg: Link to kegg annotations (AT5G10180)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462454.1)
• Pfam: Sulfate permease family (PF00916.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;