Id Trinity | TRINITY_DN50519_c0_g6_i2 |
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Name Transcript | Ll_transcript_404888 |
Sequence | CTGATTTTAATAAATTATAATAACTGAATTTTGTATGAACCAGGAAGTTTCCCTTCTCCTTCACCAAATCTAGAAGCACTTTTAAGACCCTCCATCATTC TGCTGCTTTATTAACCCAAACTTTCAAGCCCCCAATCTTGATTTCTCAGCCTCAAATTAACATGGAGCACCAAACCAGACTCACAATGTTCCTTCCAAAC TTAGTATTACTTCTAATCTTCTTTCTCCATTCAACAACGTGGACAACAGCACAAGAAGTTGGTAAGGCCTTTTTCCTTTTGAGAATTTCATGCTTTGTAC TTTATCTTGAATTGTTGTACTTGTGTGCACCGCAGTCTGTTAAATTACGGTTGTGTTAACTGCAATGGCAGCCATGCGATTGAATTACGGTCCGTGTGAA TTATTTTGTTATTTTATAAGTAAATTTTTTGTTGTTGGCATCTATGTGGCTTGCTGCGGCCCGATATGGTTGCGTTATAGCAAAATACTGTCCAATGCAA TTTTGTTGGCTGGATGCAACCAAAGCGGTCCAATGTGATTTTCTTGCATTATTGTGATTCATTGTCATAATATGATTGTACAACTGTGATATGATGCGAT TGTTACTACAACCACAATATTGCGGCAGTATCAGGTTGCTTTACAATTTGAAATACTACAGTGAAGTTTTTTGAAAATATAATGTGTGTTCATGTAGAGA ACGAGACAGAGTTTGACTACATAAAAGGGAGCAAGAAGGGGCCACCACATTGGGGTGATTTGAAGAAGGAATGGGGAGCATGTAAAAATGGAAACATGCA ATCTCCCATTGATTTGTCAAGGCATAATGTGAGAGTGGTTTCAGGTTTAGGAAAGTTGAAGAAGAACTATAAGGCTCAAAATGCTTCAATCACCAACAGA GGCCATGATATTGCGCTGAAATGGGAGAAAGATGCAGGATCAATAATCATCAATGGCATTAATTTCTTTCTACGTCAATGCCACTGGCATTCACCTTCCG AGCACACCATTAATGGCAGAAGGTATGACCTTGAGCTACACATGGTTCATGAAAGCAAGGGAAACCTGAAGAACAGGATCGCTGTTATTGGACTTTTGTT TAAGATTGGTCGGCCCGATCCTATACTCTCCAAGGTAATCTTTTACTCCTTTTGTAGTTCTAACTTCTAACCAATATTATTAAGCCCCTCCAAATCAAAC TCAATTTCATATAAATTTTGATCACTCAGTCGTACCAGAATGTATATTATCTACTTCTATGAATATGTGTAATTATTTATAGTTAATAATCATCTATATT TATATTGGAGTAATGTTCTATTTACTGAAATGGACTAGAACATTTGATTAGTGTTTCTACATTTTTTAAATTTAAAATGAATCATCCGATTAGTTTTTCA AATATTATTTCAGGTTAATATAGTTTAATCCAATTGAACTAAAACTTTTATTGTCCAAAATGGTTTAATCAATCATTTGGTTAAGAGTATGAACCATAAT CATCTATAAATCTGGTCAACGATCAAACTATCTGGTCTTATTGGATCGTGATAAATTACTGAATGATAAAATAATTAGGCATATAATTAATTACTGAAGG ATGAGTTTAACGAGAATATTTATTGATGTTAATATTTATGTACATTGCAACCATATCAGTTTTCAAAATACATAAAATCCATGGTGGATGAAAAAGCAGA AAAGAACACAGGTATAATTGATCCCTCAGAAATAAAGCTGGGTGGCAAGAAGTACTACAGATACATGGGCTCCCTCACTGTCCCTCCGTGCACTGAAGGT GTAATTTGGTCCATAAACAAAAAGGTACAAGTCAATAATATGCAATTCACATTTATAACAAAGAAAAATATATTTGGAAAAAGAAAGTAGGATATTTCTA AAAGTATCTTCCAATTTTTTTCTTTGCCATGTGATTATCTTGATGAATAGTTTACCCGAAACTTTAAACTTCCTTCATAATGGTCAGATAAGGAGTGTAT CAAGGAAGCAAGTCAAATTATTAAGAGAGGCAGTCCACGATGTAAGTATTTAGTTTGATAAAAAAATATAAAGATTTATATACAGTCAATATATTATTCA TTATTTATTTATATTATTTTGTTTGGAGAATCAACGCTGATAAAAAATAAATAGGGATGATGAACTGATAATATATAAAACTTTTATATTATCAATCTAT ACATCTTTTTCTTTTCATAAAATGCACAAATAATGCACTATGCAAATGTACATAAAATAAACACAAACTATGAAATATTGCACTATCAATTAAAATTGAT TACCTTTGAGCAATTTCTTATTTTTTAAATAAAGAAATAAACTGGTTAAACCCAATATTATTTGAACCTTATCTAATTATTTTTGTGTGTTAATAACCAT ATCTAATCATTTGTTACTTATGTGATAATACTCTATGACAGCATGCAGAGAAGAACGCCAGACCAATTCAACCTCTGAATCGACGTGGGATACAACTCTA TGACCCAAAACAAAAAAAAGTAAATTGATGACATATGACACTATTTATTTTGCAGCAATATACTTTCTGTATTTGTTTTCTTAAAAATTCATTGATTGAT CGTTGCTCGTAATATGTTTCTGTAGTACATGCGAAACATCAAAACGCTTGGGATTTTGCAAATTCCTCTTCCTTTTAGTTATGTATTTTGTCATTTGTTG TGCTATCAGACAAATATTATTAAAATTTTAAGTAAATACAAATTTCTTTTTTGATGTTTTTTAAAAAAAAAAAAAC BLAST |
Tissue | pods |
Gene name | LI_gene_177790; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_404888
Blastp | Alpha carbonic anhydrase 7 from Arabidopsis with 56.55% of identity |
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Blastx | Alpha carbonic anhydrase 7 from Arabidopsis with 56.55% of identity |
Eggnog | Carbonic anhydrase(COG3338) |
Kegg | Link to kegg annotations (AT1G08080) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019443083.1) |
Pfam | Eukaryotic-type carbonic anhydrase (PF00194.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |