| Id Trinity | TRINITY_DN50520_c1_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_403257 |
| Sequence | CGCATTTCCCTTCTTTATCAGAGTATGATCTGGAATTGTTTGTATATGCCCATGACATTATCATACCTTAAAATTGATTTATTTCTTTTTTCCTTCCTTG GTTTTAGAGGAATGTAATATCTAGTATAAGTCCCGCAGATCTGGCCAAGAACCAACTTTCCCAAACGCTTAAGTTATTGGGTGAAACCACATGAATGGTT TTAACACTCCCCTCACACAATACTCCTGCAATAACCCTTTTGGCTTGAAGTAGGCACTATACACAGGTCCACCATACCTTATGCTGAATTTAACTTCTTT TATTTGTTTAGAAGAATTGCGACAGCAATGATTGAATTCCTGACTACTTGGTCAAGGGGCTCTGATACGAAGTCGAGAACCAACTTTTCCAAAAGCTTAA GCTGTTGGATGAAAAACAAGAATGGTTTTATATATCGAACAATCCTCCATCTGATCTGAATAACAGATCATTGATCTTTCTTTATCCATGTCTCTTTATC CCTTTCATGTACCAAATACATCTGTACCTATTATTGAGCTTGTATCATCTTGTATTTGTATATTTGTCATAATATTATTCTATTTTGATTTTTTATATAG GAGGATCAGAGAAACAATAACTCAGTACAAAGGGAACCTTGTACTAGAATTGCAGCAAAGATCTATAGAATTCAGTTCTATTATTGCAAAGCATCAAAGT ATTAGGTCGACACTTGTAGACAGGATGCCAGTTTTGAATGAGGCAACTTTCATTGGCAAGAGGGCTGGTTCTCTTCCAGACGCAGCTTCAATTCAATCGG GGCCTTCAGTTAATCTTCCAAATGGAGTAGCCAAACCTTCGGCTCCTCTTCTAGATCTTCTGGATCTAAGTTCAGATGAAGCACCTGCACCAAGCTCTTC TGGTGGTGATCTTATTCAGGATCTTCTCGGTGTTGATCTGTCTATGCCTTCACAACAGTCTGGTGCTAGTCAAAGCTCAAAAAGTGGCACAGATGTTCTT TTGGATCTTTTGTCCATTGGATCACCTCCAGCACCTACTCAATCGCCTTCTGTACAAAATAACTCGTCTATTATAGACGTATTATCCCCCGATACAACTA AAAAACCTTCAGATTCACCATTAGATGATCTCTCATCGCTTTCACTCTCTTCAAGGGGAACTTCAAATGGTGGAGCTGCTCCTATGATGGATTCATTGGA TGCTCTTCCCACCAGTCCACCAGCAGAAAACAATGGACCTGTTTATCCATCCATAACTGCATTCGAGAGCAACTTCTTGAGGTTGATATTCGATTTCTCA AAACAGACAGGAAACCTACAAACTACAAATATCCAGGCCACCTTTACGAATTTGTCGTCTAATGTATATACAGATTTTGTTTTTCAGGCAGCAGTTCCAA AGTTTCTTCAGTTGCAGTTAGATCCAGCTAGCAGCAACACTCTCCCTGCTAGTGGAAATGGATCCATCACACAAAGTATGAGAGTTACTAATAGCCAATA TGGGAAGGTAGGTTTTCTTTGTTAGTTAACCTTTAATGTAAATAATTTGTGTTCTACCATATACCTCCTTTATGATTTATGTTGGTAAGTGCCTTCAGAG GCCGAGCTTGGCACAACGGTGAGGTTGTTGCTTAGTGACTGGTCGACCAGGTTGAAATCATGGAAATAACTTCTCTGCTTATGGGGGTAAGGCTGTGTAT ATCTACCCTTCATGCTCCACTAAGTGCGAGCCTCGTATATTGGGTCACCCGTTTTTGTAAGTGCTTTGAGAGAAGACTTGATGGCTAAGAAACTAATCTT TTTTTCAGAAATCTGTTGTCATGCGCATAAGGATAGCCTACAAGATAAATGGCAAGGATACACTAGAGGAAGGACAAATCAGTAATTTTCCTCGTGATTT ATGAGGCCAATTGGCCAGTGCTCATAATGGTAATTACTAATTACAGTGAATATCGTTTTTTTTTTATACTTAATAAACATTGGCGCAGTTCATGTTTCAT TCCTTCAACTAAGGTTGGAACGTTGAAATGGTTCAAGCAACTAGGAGCACTTTCTGGTCCAAATTTGAGTTCTTTTTGGTGTCTTCAAATCTTTGCTTTA CAAATTATTTTTTCTTCATTAAGTTGCGAAGTATTCTTGTATGAAAATGTCCAAAATCAAAATTTGCCTTTTGCGGCACATAGTATTCTTTCACATAAAG AAATCTTGCTGTTTTAAGGGTTTGGTGTTGAATGCAATTTGATATCTCATGTATATTGTAGACAATGGCTATAGTCTATTTTGTTTTCTGTAATTGTGCA ACGTAACCCTAAACTATTTCCAAAATTTCCTATCTTCATGTCTCAAGTTAATCATAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_177795; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_403257
| Blastp | AP-1 complex subunit gamma-2 from Arabidopsis with 56.91% of identity |
|---|---|
| Blastx | AP-1 complex subunit gamma-1 from Arabidopsis with 54.49% of identity |
| Eggnog | Adaptor-related protein complex(ENOG410XPKK) |
| Kegg | Link to kegg annotations (AT1G60070) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019439200.1) |
| Pfam | Adaptin C-terminal domain (PF02883.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |