Ll_transcript_404407

• Id Trinity: TRINITY_DN50521_c5_g2_i11
• Name Transcript: Ll_transcript_404407
• Sequence: TTCTTTTTTCCTTTCATTTGCGTTGTAACGTTGTTCACTTCAACTCTACCATTATTCTCTTATTTTAATAATAAAAATTCCTTTCTCTTTCTCTCTCTTT GAAATTCGATTTGGGATCTATAAACTCGAACGACGTCGTTGCAGCTCTTCTTCTTCTTCCGATTCAATTCTCTTTCGCCGGCGATTCAGGTTCCGATGGC GACGGAGCAGTTTATGTCCGGGGACGGTCCCCGATACGTTCAGATGAATTCAACGCCGCCGTCGTCGCCAGCAGCAGAGGAGATGACGTCTGTTCCGTCG TTCCGGCACGGTGGCTGTGAGACCACTCGGATTTTTGAGGAATTGCCCAAAGCCAACATCGTTTCGGTGTCTCGTCCCGATGCCAGTGACATAAGCCCTA TGCAACTCTCCTATACTATTCAGTTTCAGTACAAACAGTTCAAGTGGGAGCTAGTGAAGAAAGCTTCTCATGTATTTTATTTGCACTTTACATTAAAGAA ACGGGTCTTTATTGAGGAAATTCATGAGAAGCAAGAGCAGGTTAAAGAATGGCTTCAAAATCTAGGAATAGGAGAGCACACTGCTATGGTACAGGATGAT GATGAAGCTGACGATGAAACAATTCCTTTACATACTGATGAAAGTGCTAAAAACAGAGATGTTCCATCGAGTGCTGCTCTACCAATTATACGGCCAGCCT TAGGTAGACAGCAGTCTATATCAGACAGGGCAAAGAATGCGATGCAAGGGTATCTGAATCACTTTTTGGGGAATATCAGTATTGTTAACTCTCGAGAGGT TTGCAAGTTTTTGGAGGTATCGAAGTTATCTTTTTCACCTGAATACGGCCCTAAGCTGAAGGAAGAATATGTAATGGTGAAGCATCTGCCTAAAATTCCA AGGGACAATGATTCCAGAAAGTGTTGTATGTCTGGATGTTTTAGTTGTTGTAATGACAACTGGCAAAAGGTATGGGCCGTACTGAAACCTGGATTCTTGG CATTGCTGGCAGATCCTTTTGATACACAACCCTTGGACCTCATTGTTTTTGATGTATTGCCTGCTTCAGATCGCAATGGGGATGGCCGTCTATCACTAGC GAGTGAAGTGAAGGAACGGAATCCTTTACGCCATTCGTTCAAGGTGACTTGTGGAATTCGGAGCATTAGAATTAGGGTGAAAAGTAGTGGTAAAGGTAAA GATTGGGTTGCTGCAATTAATGATGCTGGACTCAGGCCTCCTGAAGGCTGGTGTCATCCTCACCGGTATGGTTCTTTTGCTCCTCCAAGAGGACTGAATG AAGATGGCAGTCAAGCACAGTGGTTCATAGATGGGCGAGCAGCATTTGAGGCCATTGCTACTTCAATTGAAGATGCAAAAGCAGAGGTTTGATATTTCAG TGTCAGAACATTCAAGGCCACTTTCATGATAGTTTTCCTTTATCTATTTTTATCTGATAAAATAATAATTGTGTTTTAGTTTATGTTAAATGGTAGACTG AAAATATTCGTGCAGATATATATCTGTGGGTGGTGGCTGTGCCCAGAACTGTATCTACGTCGACCTTTCAATAATCATGCTTCATCAAGACTTGATAGTT TGCTGGAAGCAAAAGCTAAGCAAGGAGTTCAGATTTACATTCTTCTCTACAAAGAGGTGGCTCTTGCTTTGAAAATCAACAGTGTTTATAGCAAGAGAAA GCTTCTTAGCATTCATGAGAATGTGAGGGTATTACGCTATCCTGACCACTTTTCTTCTGGCATTTATCTGTGGTCGCACCATGAAAAACTTGTCATTGTT GATAACCATGTTAGCTTTATTGGAGGACTGGATTTATGCTTTGGTCGTTATGACACATCTGAGCATAAAGTAGGAGATTCCCCCCCTAAAATCTGGCCTG GAAAGGACTATTATAACCCTAGAGAGTCTGAGCCAAATTCATGGGAAGATACAATGAAAGATGAATTGGAACGTGAAAAATATCCTCGTATGCCTTGGCA TGATGTTCATTGTGCCCTCTGGGGACCACCTTGTCGTGATATTGCTAGGCACTTTGTTCAGCGATGGAATTATGCTAAGAGGAGCAAAGCTCCATATGAG CAAGCAATACCATTACTTATGCCTCAGCATCATATGGTTATTCCACACTACTTGGGAGGAAGCAGAGAGATCCAGATTGAAAGCAGTAACACTGGCAATT ATAAACTCATCAAAAGACAAGGTTCATTTTCCTCATCATCTGTAGACCATGATATTCCTCTACTCTTGCCTCAGGAGCCTGGTGAGCTGAATACTCTTGA TGGAGACCCAAAACTGAATGGGGTAAGCTCCTTTTCACATCGCCTTGACAAGCCAAGCAGGGTCAGCAGTGGTCTTCCTTTCTCTTTCCGGAAGCCCAAA AGTGAAGCTAGTGGTTCAGATACACCAATGAAGGGCTTTGTAGATGATATTGACTCTGTACATTATCGTGAAAAAACGTCTCTGGATAGAGTGGCTCATG CTGATTTACAAAATACAGACTCTGCATGGTGGGAAACACAGGAACGGGGTGGTCAGGGAGGCTTTGAAGATGAATCAGGACAAGTTGGTCCCCGTGCTTC CTGCCGTTGTCAGGTTATTAGGAGTGTTAGTCAATGGTCTGCTGGAACAAGCCAAACCGAAGAGAGCATCCACAATGCTTATTGCTCTCTTATTGAGAAA GCAGAATACTTCATTTACATCGAGAATCAATTTTTTATTTCAGGACTTTCTGGAGATGAGATGATACGAAATCGTGTGTTAGAAGCTTTGTACCGACGGA TTATGCGAGCGTACAATGACAAAAAATCTTTTCGAGTTATAATTGTCATACCTCTCCTGCCTGGCTTCCAGGGGGGGCTTGATGATAGTGGTGCAGCATC TGTGAGAGCCATAATGCATTGGCAGTATCGAACTATTTGCAGAGGGCAGGAATCTATATTACATAATCTTTATGGACTTCTTGGTTCAAGAATACATGAC TATATCTCTTTTTATGGCCTGAGATCTTATGGTAGACTCTCTCCTAGTGGTCCTGTGGCAACCAGCCAGGTGTATGTTCATAGTAAAATCATGATTGTTG ATGATTGTACAACTTTGATAGGATCTGCCAATATTAATGATAGGAGCTTACTTGGCGCCAGAGATTCTGAGATTGGTGTTGTTATAGAAGACAGAGAGTT TGTCAGTTCTTATATGGATGGAAAGCCTTGGAAAGCAGGAAAGTTCTCCATGACTCTCCGATTGTCATTATGGTCTGAGCACTTAGGTTTGCAAGCAGGA GAGGTCAATCAAATAATCGACCCAGTTATTGAGTCAACTTACAAGGATATTTGGATGGCAACAGCAAAGACAAATACTACAATTTACCAGGATGTCTTTT CGTGCGTGCCTAATGATCTGATACACACCAGAGTTGCCTTCAGACAAAGCTTGGCTTTTTGGAAAGAAAAAATTGGTCACACTACCATTGATTTAGGAAT TGCCCAAGATAAAATAGAATCCTACCATAATGGTGATATCAAGCACACTGATCCCTTGGATAGATTAGCATCAGTGAGGGGTCATCTTGTTTCATTTCCC TTGGAGTTCATGTGCCAAGAAAATCTAAGACCGGCTTTTAACGAAAGCGAATACTATGCCTCTCAAGTTTTCCATTGAGTACAATGTCTGAGCATATAAA ACAACATCAACAGTATATATATTTTAAATTTATACAGGGTTTTTTTAATTTATTACTTGCAGAATTTTCTTTTTATTACAATTCTGCGAGCAGAGAGATG AAAGGGAGGGAGGGATGAAGGTATAATAATGGTATTTTTGTAAGGGGTGTATTTATAATTGAGTACTGTATAAAATTCATCAGTTTAACTTTCATAGAAA AAGGATCAGTTCAGGAATATACACTGATGTGTACTTTATACTTTGTATCAATAAAAATACAATAATAATTCGTCAATCATCTATCTAACAATTTGCTATG TTTCTTCTCC
• Tissue: pods
• Gene name: LI_gene_177808;
• Additional information: details;

Expression of Ll_transcript_404407

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.1
• PS2: 0.3
• PS3: 0.1
• PW1: 0.8
• PW2: 0.3
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_404407

• Blastp: Phospholipase D zeta 1 from Arabidopsis with 74.03% of identity
• Blastx: Phospholipase D zeta 1 from Arabidopsis with 70.69% of identity
• Eggnog: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol (By similarity)(COG1502)
• Kegg: Link to kegg annotations (AT3G16785)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419033.1)
• Pfam: Phospholipase D Active site motif (PF00614.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;