| Id Trinity | TRINITY_DN50521_c5_g2_i12 |
|---|---|
| Name Transcript | Ll_transcript_404408 |
| Sequence | TTCTTTTTTCCTTTCATTTGCGTTGTAACGTTGTTCACTTCAACTCTACCATTATTCTCTTATTTTAATAATAAAAATTCCTTTCTCTTTCTCTCTCTTT GAAATTCGATTTGGGATCTATAAACTCGAACGACGTCGTTGCAGCTCTTCTTCTTCTTCCGATTCAATTCTCTTTCGCCGGCGATTCAGGTTCCGATGGC GACGGAGCAGTTTATGTCCGGGGACGGTCCCCGATACGTTCAGATGAATTCAACGCCGCCGTCGTCGCCAGCAGCAGAGGAGATGACGTCTGTTCCGTCG TTCCGGCACGGTGGCTGTGAGACCACTCGGATTTTTGAGGAATTGCCCAAAGCCAACATCGTTTCGGTGTCTCGTCCCGATGCCAGTGACATAAGCCCTA TGCAACTCTCCTATACTATTCAGTTTCAGTACAAACAGTTCAAGTGGGAGCTAGTGAAGAAAGCTTCTCATGTATTTTATTTGCACTTTACATTAAAGAA ACGGGTCTTTATTGAGGAAATTCATGAGAAGCAAGAGCAGGAATAGGAGAGCACACTGCTATGGTACAGGATGATGATGAAGCTGACGATGAAACAATTC CTTTACATACTGATGAAAGTGCTAAAAACAGAGATGTTCCATCGAGTGCTGCTCTACCAATTATACGGCCAGCCTTAGGTAGACAGCAGTCTATATCAGA CAGGGCAAAGAATGCGATGCAAGGGTATCTGAATCACTTTTTGGGGAATATCAGTATTGTTAACTCTCGAGAGGTTTGCAAGTTTTTGGAGGTATCGAAG TTATCTTTTTCACCTGAATACGGCCCTAAGCTGAAGGAAGAATATGTAATGGTGAAGCATCTGCCTAAAATTCCAAGGGACAATGATTCCAGAAAGTGTT GTATGTCTGGATGTTTTAGTTGTTGTAATGACAACTGGCAAAAGGTATGGGCCGTACTGAAACCTGGATTCTTGGCATTGCTGGCAGATCCTTTTGATAC ACAACCCTTGGACCTCATTGTTTTTGATGTATTGCCTGCTTCAGATCGCAATGGGGATGGCCGTCTATCACTAGCGAGTGAAGTGAAGGAACGGAATCCT TTACGCCATTCGTTCAAGGTGACTTGTGGAATTCGGAGCATTAGAATTAGGGTGAAAAGTAGTGGTAAAGGTAAAGATTGGGTTGCTGCAATTAATGATG CTGGACTCAGGCCTCCTGAAGGCTGGTGTCATCCTCACCGGTATGGTTCTTTTGCTCCTCCAAGAGGACTGAATGAAGATGGCAGTCAAGCACAGTGGTT CATAGATGGGCGAGCAGCATTTGAGGCCATTGCTACTTCAATTGAAGATGCAAAAGCAGAGGTTTGATATTTCAGTGTCAGAACATTCAAGGCCACTTTC ATGATAGTTTTCCTTTATCTATTTTTATCTGATAAAATAATAATTGTGTTTTAGTTTATGTTAAATGGTAGACTGAAAATATTCGTGCAGATATATATCT GTGGGTGGTGGCTGTGCCCAGAACTGTATCTACGTCGACCTTTCAATAATCATGCTTCATCAAGACTTGATAGTTTGCTGGAAGCAAAAGCTAAGCAAGG AGTTCAGATTTACATTCTTCTCTACAAAGAGGTGGCTCTTGCTTTGAAAATCAACAGTGTTTATAGCAAGAGAAAGCTTCTTAGCATTCATGAGAATGTG AGGGTATTACGCTATCCTGACCACTTTTCTTCTGGCATTTATCTGTGGTCGCACCATGAAAAACTTGTCATTGTTGATAACCATGTTAGCTTTATTGGAG GACTGGATTTATGCTTTGGTCGTTATGACACATCTGAGCATAAAGTAGGAGATTCCCCCCCTAAAATCTGGCCTGGAAAGGACTATTATAACCCTAGAGA GTCTGAGCCAAATTCATGGGAAGATACAATGAAAGATGAATTGGAACGTGAAAAATATCCTCGTATGCCTTGGCATGATGTTCATTGTGCCCTCTGGGGA CCACCTTGTCGTGATATTGCTAGGCACTTTGTTCAGCGATGGAATTATGCTAAGAGGAGCAAAGCTCCATATGAGCAAGCAATACCATTACTTATGCCTC AGCATCATATGGTTATTCCACACTACTTGGGAGGAAGCAGAGAGATCCAGATTGAAAGCAGTAACACTGGCAATTATAAACTCATCAAAAGACAAGGTTC ATTTTCCTCATCATCTGTAGACCATGATATTCCTCTACTCTTGCCTCAGGAGCCTGGTGAGCTGAATACTCTTGATGGAGACCCAAAACTGAATGGGGTA AGCTCCTTTTCACATCGCCTTGACAAGCCAAGCAGGGTCAGCAGTGGTCTTCCTTTCTCTTTCCGGAAGCCCAAAAGTGAAGCTAGTGGTTCAGATACAC CAATGAAGGGCTTTGTAGATGATATTGACTCTGTACATTATCGTGAAAAAACGTCTCTGGATAGAGTGGCTCATGCTGATTTACAAAATACAGACTCTGC ATGGTGGGAAACACAGGAACGGGGTGGTCAGGGAGGCTTTGAAGATGAATCAGGACAAGTTGGTCCCCGTGCTTCCTGCCGTTGTCAGGTTATTAGGAGT GTTAGTCAATGGTCTGCTGGAACAAGCCAAACCGAAGAGAGCATCCACAATGCTTATTGCTCTCTTATTGAGAAAGCAGAATACTTCATTTACATCGAGA ATCAATTTTTTATTTCAGGACTTTCTGGAGATGAGATGATACGAAATCGTGTGTTAGAAGCTTTGTACCGACGGATTATGCGAGCGTACAATGACAAAAA ATCTTTTCGAGTTATAATTGTCATACCTCTCCTGCCTGGCTTCCAGGGGGGGCTTGATGATAGTGGTGCAGCATCTGTGAGAGCCATAATGCATTGGCAG TATCGAACTATTTGCAGAGGGCAGGAATCTATATTACATAATCTTTATGGACTTCTTGGTTCAAGAATACATGACTATATCTCTTTTTATGGCCTGAGAT CTTATGGTAGACTCTCTCCTAGTGGTCCTGTGGCAACCAGCCAGGTGTATGTTCATAGTAAAATCATGATTGTTGATGATTGTACAACTTTGATAGGATC TGCCAATATTAATGATAGGAGCTTACTTGGCGCCAGAGATTCTGAGATTGGTGTTGTTATAGAAGACAGAGAGTTTGTCAGTTCTTATATGGATGGAAAG CCTTGGAAAGCAGGAAAGTTCTCCATGACTCTCCGATTGTCATTATGGTCTGAGCACTTAGGTTTGCAAGCAGGAGAGGTCAATCAAATAATCGACCCAG TTATTGAGTCAACTTACAAGGATATTTGGATGGCAACAGCAAAGACAAATACTACAATTTACCAGGATGTCTTTTCGTGCGTGCCTAATGATCTGATACA CACCAGAGTTGCCTTCAGACAAAGCTTGGCTTTTTGGAAAGAAAAAATTGGTCACACTACCATTGATTTAGGAATTGCCCAAGATAAAATAGAATCCTAC CATAATGGTGATATCAAGCACACTGATCCCTTGGATAGATTAGCATCAGTGAGGGGTCATCTTGTTTCATTTCCCTTGGAGTTCATGTGCCAAGAAAATC TAAGACCGGCTTTTAACGAAAGCGAATACTATGCCTCTCAAGTTTTCCATTGAGTACAATGTCTGAGCATATAAAACAACATCAACAGTATATATATTTT AAATTTATACAGGGTTTTTTTAATTTATTACTTGCAGAATTTTCTTTTTATTACAATTCTGCGAGCAGAGAGATGAAAGGGAGGGAGGGATGAAGGTATA ATAATGGTATTTTTGTAAGGGGTGTATTTATAATTGAGTACTGTATAAAATTCATCAGTTTAACTTTCATAGAAAAAGGATCAGTTCAGGAATATACACT GATGTGTACTTTATACTTTGTATCAATAAAAATACAATAATAATTCGTCAATCATCTATCTAACAATTTGCTATGTTTCTTCTCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_177808; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_404408
| Blastp | Phospholipase D zeta 1 from Arabidopsis with 74.03% of identity |
|---|---|
| Blastx | Phospholipase D zeta 1 from Arabidopsis with 70.89% of identity |
| Eggnog | Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol (By similarity)(COG1502) |
| Kegg | Link to kegg annotations (AT3G16785) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419033.1) |
| Pfam | Phospholipase D Active site motif (PF00614.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |