| Id Trinity | TRINITY_DN50521_c5_g2_i17 |
|---|---|
| Name Transcript | Ll_transcript_404414 |
| Sequence | TTCTTTTTTCCTTTCATTTGCGTTGTAACGTTGTTCACTTCAACTCTACCATTATTCTCTTATTTTAATAATAAAAATTCCTTTCTCTTTCTCTCTCTTT GAAATTCGATTTGGGATCTATAAACTCGAACGACGTCGTTGCAGCTCTTCTTCTTCTTCCGATTCAATTCTCTTTCGCCGGCGATTCAGGTTCCGATGGC GACGGAGCAGTTTATGTCCGGGGACGGTCCCCGATACGTTCAGATGAATTCAACGCCGCCGTCGTCGCCAGCAGCAGAGGAGATGACGTCTGTTCCGTCG TTCCGGCACGGTGGCTGTGAGACCACTCGGATTTTTGAGGAATTGCCCAAAGCCAACATCGTTTCGGTGTCTCGTCCCGATGCCAGTGACATAAGCCCTA TGCAACTCTCCTATACTATTCAGTTTCAGTACAAACAGTTCAAGTGGGAGCTAGTGAAGAAAGCTTCTCATGTATTTTATTTGCACTTTACATTAAAGAA ACGGGTCTTTATTGAGGAAATTCATGAGAAGCAAGAGCAGGTTAAAGAATGGCTTCAAAATCTAGGAATAGGAGAGCACACTGCTATGGTACAGGATGAT GATGAAGCTGACGATGAAACAATTCCTTTACATACTGATGAAAGTGCTAAAAACAGAGATGTTCCATCGAGTGCTGCTCTACCAATTATACGGCCAGCCT TAGGTAGACAGCAGTCTATATCAGACAGGGCAAAGAATGCGATGCAAGGGTATCTGAATCACTTTTTGGGGAATATCAGTATTGTTAACTCTCGAGAGGT TTGCAAGTTTTTGGAGGTATCGAAGTTATCTTTTTCACCTGAATACGGCCCTAAGCTGAAGGAAGAATATGTAATGGTGAAGCATCTGCCTAAAATTCCA AGGGACAATGATTCCAGAAAGTGTTGTATGTCTGGATGTTTTAGTTGTTGTAATGACAACTGGCAAAAGGTATGGGCCGTACTGAAACCTGGATTCTTGG CATTGCTGGCAGATCCTTTTGATACACAACCCTTGGACCTCATTGTTTTTGATGTATTGCCTGCTTCAGATCGCAATGGGGATGGCCGTCTATCACTAGC GAGTGAAGTGAAGGAACGGAATCCTTTACGCCATTCGTTCAAGGTGACTTGTGGAATTCGGAGCATTAGAATTAGGGTGAAAAGTAGTGGTAAAGGTAAA GATTGGGTTGCTGCAATTAATGATGCTGGACTCAGGCCTCCTGAAGGCTGGTGTCATCCTCACCGGTATGGTTCTTTTGCTCCTCCAAGAGGACTGAATG AAGATGGCAGTCAAGCACAGTGGTTCATAGATGGGCGAGCAGCATTTGAGGCCATTGCTACTTCAATTGAAGATGCAAAAGCAGAGATATATATCTGTGG GTGGTGGCTGTGCCCAGAACTGTATCTACGTCGACCTTTCAATAATCATGCTTCATCAAGACTTGATAGTTTGCTGGAAGCAAAAGCTAAGCAAGGAGTT CAGATTTACATTCTTCTCTACAAAGAGGTGGCTCTTGCTTTGAAAATCAACAGTGTTTATAGCAAGAGAAAGCTTCTTAGCATTCATGAGAATGTGAGGG TATTACGCTATCCTGACCACTTTTCTTCTGGCATTTATCTGTGGTCGCACCATGAAAAACTTGTCATTGTTGATAACCATGTTAGCTTTATTGGAGGACT GGATTTATGCTTTGGTCGTTATGACACATCTGAGCATAAAGTAGGAGATTCCCCCCCTAAAATCTGGCCTGGAAAGGACTATTATAACCCTAGAGAGTCT GAGCCAAATTCATGGGAAGATACAATGAAAGATGAATTGGAACGTGAAAAATATCCTCGTATGCCTTGGCATGATGTTCATTGTGCCCTCTGGGGACCAC CTTGTCGTGATATTGCTAGGCACTTTGTTCAGCGATGGAATTATGCTAAGAGGAGCAAAGCTCCATATGAGCAAGCAATACCATTACTTATGCCTCAGCA TCATATGGTTATTCCACACTACTTGGGAGGAAGCAGAGAGATCCAGATTGAAAGCAGTAACACTGGCAATTATAAACTCATCAAAAGACAAGGTTCATTT TCCTCATCATCTGTAGACCATGATATTCCTCTACTCTTGCCTCAGGAGCCTGGTGAGCTGAATACTCTTGATGGAGACCCAAAACTGAATGGGGTAAGCT CCTTTTCACATCGCCTTGACAAGCCAAGCAGGGTCAGCAGTGGTCTTCCTTTCTCTTTCCGGAAGCCCAAAAGTGAAGCTAGTGGTTCAGATACACCAAT GAAGGGCTTTGTAGATGATATTGACTCTGTACATTATCGTGAAAAAACGTCTCTGGATAGAGTGGCTCATGCTGATTTACAAAATACAGACTCTGCATGG TGGGAAACACAGGAACGGGGTGGTCAGGGAGGCTTTGAAGATGAATCAGGACAAGTTGGTCCCCGTGCTTCCTGCCGTTGTCAGGTTATTAGGAGTGTTA GTCAATGGTCTGCTGGAACAAGCCAAACCGAAGAGAGCATCCACAATGCTTATTGCTCTCTTATTGAGAAAGCAGAATACTTCATTTACATCGAGAATCA ATTTTTTATTTCAGGACTTTCTGGAGATGAGATGATACGAAATCGTGTGTTAGAAGCTTTGTACCGACGGATTATGCGAGCGTACAATGACAAAAAATCT TTTCGAGTTATAATTGTCATACCTCTCCTGCCTGGCTTCCAGGGGGGGCTTGATGATAGTGGTGCAGCATCTGTGAGAGCCATAATGCATTGGCAGTATC GAACTATTTGCAGAGGGCAGGAATCTATATTACATAATCTTTATGGACTTCTTGGTTCAAGAATACATGACTATATCTCTTTTTATGGCCTGAGATCTTA TGGTAGACTCTCTCCTAGTGGTCCTGTGGCAACCAGCCAGGTATTATTTCACACCTATTGTCTTATACTTAACTACTGCCAGTCAGCTTAATGAACTATT CATTTTTGCAGGTGTATGTTCATAGTAAAATCATGATTGTTGATGATTGTACAACTTTGATAGGATCTGCCAATATTAATGATAGGAGCTTACTTGGCGC CAGAGATTCTGAGGTATAGTTCCAAGCCTTCTTCCCATCATTTGCTGTGTAAGTTTGATTGGCGCTTTTGACATACCGATTCACTCTCACTGTCCCTCAT TTCATTAACCCACATTATAACAATTTATCAAGTGAACCACATATGTTCCATTTCATTTGTCAGGATTTATTTTAATTTTTAAAGTATCCTAGATGATTCT CACAGGATTTATTTCCTCTTTATAGTCCATAATTGGTTTCCTTATTTAATTAGGATAGAGGTCTACTATTACTATTTGGTTTGCCTTTTGTGTCACATCA CATGGCATCAAATCAATCATATATCACATAATTCTATCAATATTCTTATGATTTTGTAGTCCCTCTCTCTTCCTGATTCCCTACCCCTAAACTCCATTCT TATATTTTAGAATGAAGGCATTTAATATCTAGTTAGTCTTTTCGCTTCTAAACATATTTAACTGGAAAGTTTTGGTGGGCACGCTGCAAATTAAATTGTC GATGTTCCATGTAACTTCGAATTTCATTCCACATTTTTATGATTATCACAAACTTAAGCACAACTACTTAATTTAAAATATATAACTAATTTAATGAAAG AGTAATTTCAACTGATTAGTATATATTACTGCCAACATTGTTCCTTTTTAGTCACACTTAAAATATGTTTCTCGAATAAACTGATTA BLAST |
| Tissue | pods |
| Gene name | LI_gene_177808; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_404414
| Blastp | Phospholipase D zeta 1 from Arabidopsis with 71.35% of identity |
|---|---|
| Blastx | Phospholipase D zeta 1 from Arabidopsis with 71.35% of identity |
| Eggnog | Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol (By similarity)(COG1502) |
| Kegg | Link to kegg annotations (AT3G16785) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419033.1) |
| Pfam | Phospholipase D Active site motif (PF00614.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |