Ll_transcript_404396

• Id Trinity: TRINITY_DN50521_c5_g2_i2
• Name Transcript: Ll_transcript_404396
• Sequence: TTCTTTTTTCCTTTCATTTGCGTTGTAACGTTGTTCACTTCAACTCTACCATTATTCTCTTATTTTAATAATAAAAATTCCTTTCTCTTTCTCTCTCTTT GAAATTCGATTTGGGATCTATAAACTCGAACGACGTCGTTGCAGCTCTTCTTCTTCTTCCGATTCAATTCTCTTTCGCCGGCGATTCAGGTTCCGATGGC GACGGAGCAGTTTATGTCCGGGGACGGTCCCCGATACGTTCAGATGAATTCAACGCCGCCGTCGTCGCCAGCAGCAGAGGAGATGACGTCTGTTCCGTCG TTCCGGCACGGTGGCTGTGAGACCACTCGGATTTTTGAGGAATTGCCCAAAGCCAACATCGTTTCGGTGTCTCGTCCCGATGCCAGTGACATAAGCCCTA TGCAACTCTCCTATACTATTCAGTTTCAGTACAAACAGTTTTTCAGGAGATGAGTTTTGAGGAAGATGCTGTTGATGTTGCTTTTGCACTTTCTGCCATT TTTGTACAAGGGGACACGGTTCGTGAAAGTGTTCCATTAAATGAATTCAAATGGTGTGATACAATAGTCAAAGTCTGGGGAATCGAGAGAGATGAATTCA AACTTCAAATTCGTAAAAATGATAGCGTTCTGTTCCACTTGTCCAACACCAAACACTGAACATGACACATTGGTCTGTTTAGTTCTATGGTTACACAGGA CATCTATGCTTTGTTCCATTCTGTTCTTTTATGTTTCATCTTGTTCGTGTGCCAAATGCTACCTTAGCGTCCTTACCTCGTATGTCTCCCTGTTTCTGTT GATGGTTGGATTTCAAGTGGGAGCTAGTGAAGAAAGCTTCTCATGTATTTTATTTGCACTTTACATTAAAGAAACGGGTCTTTATTGAGGAAATTCATGA GAAGCAAGAGCAGGTTAAAGAATGGCTTCAAAATCTAGGAATAGGAGAGCACACTGCTATGGTACAGGATGATGATGAAGCTGACGATGAAACAATTCCT TTACATACTGATGAAAGTGCTAAAAACAGAGATGTTCCATCGAGTGCTGCTCTACCAATTATACGGCCAGCCTTAGGTAGACAGCAGTCTATATCAGACA GGGCAAAGAATGCGATGCAAGGGTATCTGAATCACTTTTTGGGGAATATCAGTATTGTTAACTCTCGAGAGGTTTGCAAGTTTTTGGAGGTATCGAAGTT ATCTTTTTCACCTGAATACGGCCCTAAGCTGAAGGAAGAATATGTAATGGTGAAGCATCTGCCTAAAATTCCAAGGGACAATGATTCCAGAAAGTGTTGT ATGTCTGGATGTTTTAGTTGTTGTAATGACAACTGGCAAAAGGTATGGGCCGTACTGAAACCTGGATTCTTGGCATTGCTGGCAGATCCTTTTGATACAC AACCCTTGGACCTCATTGTTTTTGATGTATTGCCTGCTTCAGATCGCAATGGGGATGGCCGTCTATCACTAGCGAGTGAAGTGAAGGAACGGAATCCTTT ACGCCATTCGTTCAAGGTGACTTGTGGAATTCGGAGCATTAGAATTAGGGTGAAAAGTAGTGGTAAAGGTAAAGATTGGGTTGCTGCAATTAATGATGCT GGACTCAGGCCTCCTGAAGGCTGGTGTCATCCTCACCGGTATGGTTCTTTTGCTCCTCCAAGAGGACTGAATGAAGATGGCAGTCAAGCACAGTGGTTCA TAGATGGGCGAGCAGCATTTGAGGCCATTGCTACTTCAATTGAAGATGCAAAAGCAGAGATATATATCTGTGGGTGGTGGCTGTGCCCAGAACTGTATCT ACGTCGACCTTTCAATAATCATGCTTCATCAAGACTTGATAGTTTGCTGGAAGCAAAAGCTAAGCAAGGAGTTCAGATTTACATTCTTCTCTACAAAGAG GTGGCTCTTGCTTTGAAAATCAACAGTGTTTATAGCAAGAGAAAGCTTCTTAGCATTCATGAGAATGTGAGGGTATTACGCTATCCTGACCACTTTTCTT CTGGCATTTATCTGTGGTCGCACCATGAAAAACTTGTCATTGTTGATAACCATGTTAGCTTTATTGGAGGACTGGATTTATGCTTTGGTCGTTATGACAC ATCTGAGCATAAAGTAGGAGATTCCCCCCCTAAAATCTGGCCTGGAAAGGACTATTATAACCCTAGAGAGTCTGAGCCAAATTCATGGGAAGATACAATG AAAGATGAATTGGAACGTGAAAAATATCCTCGTATGCCTTGGCATGATGTTCATTGTGCCCTCTGGGGACCACCTTGTCGTGATATTGCTAGGCACTTTG TTCAGCGATGGAATTATGCTAAGAGGAGCAAAGCTCCATATGAGCAAGCAATACCATTACTTATGCCTCAGCATCATATGGTTATTCCACACTACTTGGG AGGAAGCAGAGAGATCCAGATTGAAAGCAGTAACACTGGCAATTATAAACTCATCAAAAGACAAGGTTCATTTTCCTCATCATCTGTAGACCATGATATT CCTCTACTCTTGCCTCAGGAGCCTGGTGAGCTGAATACTCTTGATGGAGACCCAAAACTGAATGGGGTAAGCTCCTTTTCACATCGCCTTGACAAGCCAA GCAGGGTCAGCAGTGGTCTTCCTTTCTCTTTCCGGAAGCCCAAAAGTGAAGCTAGTGGTTCAGATACACCAATGAAGGGCTTTGTAGATGATATTGACTC TGTACATTATCGTGAAAAAACGTCTCTGGATAGAGTGGCTCATGCTGATTTACAAAATACAGACTCTGCATGGTGGGAAACACAGGAACGGGGTGGTCAG GGAGGCTTTGAAGATGAATCAGGACAAGTTGGTCCCCGTGCTTCCTGCCGTTGTCAGGTTATTAGGAGTGTTAGTCAATGGTCTGCTGGAACAAGCCAAA CCGAAGAGAGCATCCACAATGCTTATTGCTCTCTTATTGAGAAAGCAGAATACTTCATTTACATCGAGAATCAATTTTTTATTTCAGGACTTTCTGGAGA TGAGATGATACGAAATCGTGTGTTAGAAGCTTTGTACCGACGGATTATGCGAGCGTACAATGACAAAAAATCTTTTCGAGTTATAATTGTCATACCTCTC CTGCCTGGCTTCCAGGGGGGGCTTGATGATAGTGGTGCAGCATCTGTGAGAGCCATAATGCATTGGCAGTATCGAACTATTTGCAGAGGGCAGGAATCTA TATTACATAATCTTTATGGACTTCTTGGTTCAAGAATACATGACTATATCTCTTTTTATGGCCTGAGATCTTATGGTAGACTCTCTCCTAGTGGTCCTGT GGCAACCAGCCAGGTGTATGTTCATAGTAAAATCATGATTGTTGATGATTGTACAACTTTGATAGGATCTGCCAATATTAATGATAGGAGCTTACTTGGC GCCAGAGATTCTGAGATTGGTGTTGTTATAGAAGACAGAGAGTTTGTCAGTTCTTATATGGATGGAAAGCCTTGGAAAGCAGGAAAGTTCTCCATGACTC TCCGATTGTCATTATGGTCTGAGCACTTAGGTTTGCAAGCAGGAGAGGTCAATCAAATAATCGACCCAGTTATTGAGTCAACTTACAAGGATATTTGGAT GGCAACAGCAAAGACAAATACTACAATTTACCAGGATGTCTTTTCGTGCGTGCCTAATGATCTGATACACACCAGAGTTGCCTTCAGACAAAGCTTGGCT TTTTGGAAAGAAAAAATTGGTCACACTACCATTGATTTAGGAATTGCCCAAGATAAAATAGAATCCTACCATAATGGTGATATCAAGCACACTGATCCCT TGGATAGATTAGCATCAGTGAGGGGTCATCTTGTTTCATTTCCCTTGGAGTTCATGTGCCAAGAAAATCTAAGACCGGCTTTTAACGAAAGCGAATACTA TGCCTCTCAAGTTTTCCATTGAGTACAATGTCTGAGCATATAAAACAACATCAACAGTATATATATTTTAAATTTATACAGGGTTTTTTTAATTTATTAC TTGCAGAATTTTCTTTTTATTACAATTCTGCGAGCAGAGAGATGAAAGGGAGGGAGGGATGAAGGTATAATAATGGTATTTTTGTAAGGGGTGTATTTAT AATTGAGTACTGTATAAAATTCATCAGTTTAACTTTCATAGAAAAAGGATCAGTTCAGGAATATACACTGATGTGTACTTTATACTTTGTATCAATAAAA ATACAATAATAATTCGTCAATCATCTATCTAACAATTTGCTATGTTTCTTCTCC
• Tissue: pods
• Gene name: LI_gene_177808;
• Additional information: details;

Expression of Ll_transcript_404396

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.1
• PS2: 0.1
• PS3: 0
• PW1: 0
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_404396

• Blastp: Phospholipase D zeta 1 from Arabidopsis with 74.07% of identity
• Blastx: Phospholipase D zeta 1 from Arabidopsis with 73.04% of identity
• Eggnog: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol (By similarity)(COG1502)
• Kegg: Link to kegg annotations (AT3G16785)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419033.1)
• Pfam: Phospholipase D Active site motif (PF00614.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;