Ll_transcript_404746

• Id Trinity: TRINITY_DN50529_c2_g1_i18
• Name Transcript: Ll_transcript_404746
• Sequence: TTACCTCGACGAAGAGGAAGAAGACGAAGATGAGAGAAGACGCGAGAAGAAGAAGCTCAAGCTTGTTACGAAGCTCAACCACGACGAGGATCATGATAAC AACAACAACGAGGATGAGGAAGATGAATTTGTGGAGAGGATGAAAGATGAGGAAATGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG AAGAAGAAGAGGAAGAAGGAAATGAAATTGATGTAGAGGAAAACCAAGATCAACAACAACAGCAAGAGGTTAAGGGCAGAAAAGTTGATTCTAAAGGGCT CCACTCTGTTTTAGGAACTCCACCAAAGATACTTCTTCCATCTGGCTCTGGAATTCCCTTGCCTGATAAGAGGACCCTTGAATTGATCCTTGACAAGCTT CAGAAGAAGGACACATATGGTGTGTATGCGGAGCCTGTTGATCCAGAGGAGCTTCCTGATTATCATGATGTGATTGACCATCCAATGGACTTTGCCACTG TCAGGAAGAAGTTGGAAAATGGATCTTATCCTACCTTAGAACAATTTGAGGTTTGTAAGTATGTCTCGGTTGTTCATGATTGGTGTTGTTGGAAATTTCT TTTCTTAGGTTTTGGTTATTTTTGCACTGCCATTCTACTGGGTTTGCATGTTGTCACTATGCACTTCTGCTTTTTTTCTTTAAATGGGAGAAAGTGTGCC ATACATTACTTGCATTTGACACTCAGATTGAATTAATTAAAGGCATGACTTTGTTTTTTCTTTTCTTAGTAAATTCAGCAAGGACTGCTACTGATATTGA TATATCCAGAAAAAGTGGGTTGTGAGCAAGAGACTGCCACACCTGTTGAACATCTGTCGAGCTATAGAGTAATAATGGGGATTATTTGGGTTTTTATAAT CCCCTAAATATGTTTTTCAACCTACTGATAGATTGAGTTTGGGAAAGACATAGAAGCTAGAAGCAATTTTGCTGTTTTCAGCTCCATTGCAATTTTGCTT GTTTTGGAATTGATAGATGATGCTCTTCCTCAGCCGGTGATAATAATATTACATCTGTGCTCTTAGGGACATAGAGCCCTAGAACTTTATCCTTATGGTT TGTTCTCACGTAGTCGTGTTAATTAACTTATAATAGGCACCCCAGACATTTCCTTAGATGTCTAATGTTATCAACAATGTAATTTACTAACTGGACGCTG TACTTTAATAAATACATAAACCTGTATTGTATTTGTGAGTGCACATGAATGATAAGCTTGAATTAAAAGTTAAGTTTTGTAGCAAATTTAGACACATTTT AAAATTAAAATGTTATAACTTTGTCAACTTGTATTTGTTCTTATTTAGGCTTTATGGACAAAATAAATAGGACTATGCTAGATATGGTAAACATCTAAGT ATACAATCCTTTTTATAATTTTTTGACATATATCCTACATTAACGAATAAAGGAAATTAGAGGCATTTATTTGCTTGCCTTCTATTCTATTATGAATAGC TTGCCTCTTTTTCATTTTCAAATGATTAACCTTGATATGTGCATGATCTTCTCTCATTTCTCTTTATTTGCAAAATTTCCTATTGTGGCTTTTCTTTGTA CACAGCCTGTGATTATCATTGTGATATTCAGTAAAGGCAAGAAATGAACTTCTTTCTTCACTGGTAGATCCCTTTATTGCATTAGAGTCCTTAGTTTCAT TTGTTCAATCATCTAAACTAATTTTAAACTGTGCTGCTGTGCATAGATATTGTTTTCCTGATTGAGTTGAATATTGAAAGGCATGAGATTTTACTGATAT TACCTTGACTTCTGAATGCATTTGTTGAATGCAGAGTGACATATTTTTGATTTGCTCAAATGCAATGCAATACAATGCAGTGGACACTATATACCACAAA CAGGCTCGATCAATACAAGAACTAGCACAAAAAAAATTTGAGAAGTTAAGGATTGACTTTGAACACTCTCATAGTGATCTGAAATCTTCTGATCAAAAAA TTAGATGTAATTCTTTGGTTAAGAAGCTTGCAAAGAAGCCACTGGGTGCTTCACAGGAACCTGTTGGCTCTGATTTCTCCTCAGGTGCAACTCTTGCTAC TATTGGAGATGTACAACCAACTTCCCATCCAATGCAAGGTGTCATCTATGAAAGGCGTGGCAATGCTGATGTCCTTGTGGAGGGCAATGCTTTCTTCATT GAAGCAAATCAAGAGAAAGCAGAAGATATTTTATCAGGGAAGGGTATGCTCTCCAAGCTGGGAAGGAAGTCATCTTTGCAAGATTGTGAACCTCGTGCAA CTTATAATATGTCTAATCATCCAATTACTAGATCAGATTCAATATTTATGACCTTTGAGAGTGAAATTAAGCAGCTAGTTACTGTATGTATCAAAAGGAG TGAATTTGTCCTTTAATAATTAGCTTTCTTATCTTTTTTTGAGGCACTTAATGTTGTATATTTTGGTAACAGGTTGGACTTCAAGCTGAATATTCCTATG CTAGGAGTTTGGCTCGTTTTGCTGCAACTCTGGGACCTACTGCTTGGAAAATTGCTTCTGAGAAGATTCAGCAGGCACTCCCACCTGGATGTAAGTTTGG TCGTGGTTGGGTTGGAGAGTATGAACCACTTCCAGCCCCAGTGTCCATGTTTAATAATTGTGTTCACTTTAAAGAACCTAGTTTTGTAAAGATGCAGTCT ACGAATGAGTCGATAAAGGTTGACAAAAACTGTAAGAATGTGGAACCCACCATACAACAACCTTTTAATGGACAAAGGTTTGAGGGGGAAAAGCCTTCAG TTCATCCGGGTAGTGGGCCTACATCAGAAGGAAAACCATCTTTGTTTGGTTCTGTGGCAGTAAGACCAAACACTCCTGCCAATCTCCCTTATCAGCAACC CAATGTCCAAATCAGGAACCCTGGCAAGTCGGTGAATAAGGGTTTAAAACAAATGGAATTGAACTCTTTACCACCAAGTGATCAGAATAATGCCAGTCTG GTTGCAAAGCTTACTAGTAATGCTCCCGCCGCTGTGTCAAAGCCCAGAGAGACGACACCAAGTAACACAAATATTTCGCCATCTATGCCTTTCAAGCAGT CAGATACTAATGGTATTGTTAGCGGTAACTTGCCTAATGGAAAAGTCAGGAATGATAGTATGAATAGACGAATGCCTGCTCTATCTGAGAGTACATCAAA TCAAACAGGCAGAGCAGCTCCCTTTATTGGCCATGGACCACCATCACCTCAAAGCACTTCAAATCAAACAGGAAGAGCAGTTCCCTTTTTCGCCCATGGA CAACCATCGCGTGAGAGCGCATTGAATCAGACAGGAAGAGAAGCTCCCTTTGTTTCCCATGGACAAGCATCACCTAGGAGCACACCACATCAGAAAGGAA GAGCAGCTCCTTTTGTTTCCCATGAACAACCATCATCTGAGAGCATATTGAATCAGACAGGAAGAGCAATTCCCTATGTTTCCCATGGACATCCATCACC CGAGAGCACATCAAATCAGACAGGAAGAGCATCTCCCTTTGTTTTCCATGGACAACCATCACCTGAGAGCATATCGAATCAAACAGGGAGAGCAGCTCCC ATTTTTGCCCATGGACGATCATCACATGAGAGCACATCAAATCAGAAAGGAAGAGCATCTCCCTTTATTTCCCATGGACAACCGTCACCTGAGAGCACAT TGAATCAAACAGGAAGAGCAGATCCCTTCGTTGCCCATGGACAAGAGCAGAATCTTAGTGATCCAGTTCAGCTGATGAGGATGTTAGCCGAAAAGTCTCA AAAACAACAACAGACTTCCAGTTCTTCCAATCACTCCTCTGTTGATATTCCACCACTGACACCATCTGTTCCATCTGGACGAAGAGATGGCACAGGCAAT GCTACAGGATCAGCTGCTCGGGCATGGATGTCTGTAGGAGCAGGAGGGATTAAACAAGGACCTGACAGTCCTCGTTCTAGTTCACCTAAAAATCAGATTT CCGCGGATTCATTGTATAACCCAGCGCGAGAGTTCCATCAGCATATGTCACAGATTAGGGGGGAGTTTCCGTCAAGCAGAATGTCTTTCCAGTCCGAGAA GAACACTTTTCCATTTCATGCACTTGCACATCAACCTGTGCACCCAGTTGGTGTTTCTCAGTTTCAAAACCGACCTATGATTTTCCCTCAAGTAGCAGCA CCCTCTGACCTATCAAGATTTCAAATGCAGCCCCCTTGGCAAGGTATCCGCCCTCATAGTCAACCAAAACAGAAACAGGGAACGCTTCCTCCTGACTTGA ATATCGGTTTCCAATCCCCTGGGTCACCTGCAAAGCAATCTTCTGGTGTGATGGTAGACTCACAGCAGCCGGACCTGGCTTTGCAACTATGATGTGTCGT TGCAATTTTGGTGTGGATGTTTCCACAAGAAATTGACTGGTAGTGTTTCCTACCATTGGATGCTGATTTTGTTCAGAATGCCTTGCATAAATGATGAAAG GGATACCATTTTGAACTTATGGAAGAGATGAAATAAATACCATGTGCCAGGGAATATACTGTCCCTTGGATCTTATGGTTTTCTTGAGTGGGATTTGGAT TTTGGCACAAGTTTGGTTAATATGAGTTTGCTTATGTTCAGAAGACAGTGGTGGATTTGGCAGAAGTTAACTCCATGTGACTTTCCATCTTTTCCAAATG AGGATTGCCAAATGTATTGCAACATGTCCCTGATCTATCCTGGAGTTGTTGTAGCCATAGATTATGATCAATAGGGTTGCTTAGATTTTTCAATGAGCAG GTGAAAAATCATGTTGATGCCAGGCACATTCTTTACAAATGGATGATCTAATTCAGTTGTCTAGTTATTGATTCTATTTCATGATTACTTATGTATCCGA ATTGGTGGTAGCTGGCATCACTTCTTAGTTCTTAATGCATGAGATTTACATATCACCAATGAAAAACCATAAGTGTTCCCTATATGCCACCCAAAAATCC TTCTGTTTTTCTTAGTTATGCTTTTTTTTTGCATACCTGTACAGTTTTTAACTTTGTGATTTATGTGTAAATAGTTAGTGAACAGTATGTCATTGAGTTT TGGTACAACCAAAATAGTATACAATTATCTTTGTTAAAGCATTCACTTCTTAAAGTCTTTAAAA
• Tissue: pods
• Gene name: LI_gene_177869;
• Additional information: details;

Expression of Ll_transcript_404746

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0
• PS2: 0.3
• PS3: 0.3
• PW1: 0.2
• PW2: 0
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_404746

• Blastp: FMRFamide-related neuropeptides from Lymnaea with 26.51% of identity
• Blastx: Bromodomain and PHD finger-containing protein 3 from Homo with 50% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435601.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;