| Id Trinity | TRINITY_DN50529_c2_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_404726 |
| Sequence | TTACCTCGACGAAGAGGAAGAAGACGAAGATGAGAGAAGACGCGAGAAGAAGAAGCTCAAGCTTGTTACGAAGCTCAACCACGACGAGGATCATGATAAC AACAACAACGAGGATGAGGAAGATGAATTTGTGGAGAGGATGAAAGATGAGGAAATGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG AAGAAGAGGAAGAAGGAAATGAAATTGATGTAGAGGAAAACCAAGATCAACAACAACAGCAAGAGGTTAAGGGCAGAAAAGTTGATTCTAAAGGGCTCCA CTCTGTTTTAGGAACTCCACCAAAGATACTTCTTCCATCTGGCTCTGGAATTCCCTTGCCTGATAAGAGGACCCTTGAATTGATCCTTGACAAGCTTCAG AAGAAGGACACATATGGTGTGTATGCGGAGCCTGTTGATCCAGAGGAGCTTCCTGATTATCATGATGTGATTGACCATCCAATGGACTTTGCCACTGTCA GGAAGAAGTTGGAAAATGGATCTTATCCTACCTTAGAACAATTTGAGGTTTGTAAGTATGTCTCGGTTGTTCATGATTGGTGTTGTTGGAAATTTCTTTT CTTAGGTTTTGGTTATTTTTGCACTGCCATTCTACTGGGTTTGCATGTTGTCACTATGCACTTCTGCTTTTTTTCTTTAAATGGGAGAAAGTGTGCCATA CATTACTTGCATTTGACACTCAGATTGAATTAATTAAAGGCATGACTTTGTTTTTTCTTTTCTTAGTAAATTCAGCAAGGACTGCTACTGATATTGATAT ATCCAGAAAAAGTGGGTTGTGAGCAAGAGACTGCCACACCTGTTGAACATCTGTCGAGCTATAGAGTAATAATGGGGATTATTTGGGTTTTTATAATCCC CTAAATATGTTTTTCAACCTACTGATAGATTGAGTTTGGGAAAGACATAGAAGCTAGAAGCAATTTTGCTGTTTTCAGCTCCATTGCAATTTTGCTTGTT TTGGAATTGATAGATGATGCTCTTCCTCAGCCGGTGATAATAATATTACATCTGTGCTCTTAGGGACATAGAGCCCTAGAACTTTATCCTTATGGTTTGT TCTCACGTAGTCGTGTTAATTAACTTATAATAGGCACCCCAGACATTTCCTTAGATGTCTAATGTTATCAACAATGTAATTTACTAACTGGACGCTGTAC TTTAATAAATACATAAACCTGTATTGTATTTGTGAGTGCACATGAATGATAAGCTTGAATTAAAAGTTAAGTTTTGTAGCAAATTTAGACACATTTTAAA ATTAAAATGTTATAACTTTGTCAACTTGTATTTGTTCTTATTTAGGCTTTATGGACAAAATAAATAGGACTATGCTAGATATGGTAAACATCTAAGTATA CAATCCTTTTTATAATTTTTTGACATATATCCTACATTAACGAATAAAGGAAATTAGAGGCATTTATTTGCTTGCCTTCTATTCTATTATGAATAGCTTG CCTCTTTTTCATTTTCAAATGATTAACCTTGATATGTGCATGATCTTCTCTCATTTCTCTTTATTTGCAAAATTTCCTATTGTGGCTTTTCTTTGTACAC AGCCTGTGATTATCATTGTGATATTCAGTAAAGGCAAGAAATGAACTTCTTTCTTCACTGGTAGATCCCTTTATTGCATTAGAGTCCTTAGTTTCATTTG TTCAATCATCTAAACTAATTTTAAACTGTGCTGCTGTGCATAGATATTGTTTTCCTGATTGAGTTGAATATTGAAAGGCATGAGATTTTACTGATATTAC CTTGACTTCTGAATGCATTTGTTGAATGCAGAGTGACATATTTTTGATTTGCTCAAATGCAATGCAATACAATGCAGTGGACACTATATACCACAAACAG GCTCGATCAATACAAGAACTAGCACAAAAAAAATTTGAGAAGTTAAGGATTGACTTTGAACACTCTCATAGTGATCTGAAATCTTCTGATCAAAAAATTA GATGTAATTCTTTGGTTAAGAAGCTTGCAAAGAAGCCACTGGGTGCTTCACAGGAACCTGTTGGCTCTGATTTCTCCTCAGGTGCAACTCTTGCTACTAT TGGAGATGTACAACCAACTTCCCATCCAATGCAAGGTGTCATCTATGAAAGGCGTGGCAATGCTGATGTCCTTGTGGAGGGCAATGCTTTCTTCATTGAA GCAAATCAAGAGAAAGCAGAAGATATTTTATCAGGGAAGGGTATGCTCTCCAAGCTGGGAAGGAAGTCATCTTTGCAAGATTGTGAACCTCGTGCAACTT ATAATATGTCTAATCATCCAATTACTAGATCAGATTCAATATTTATGACCTTTGAGAGTGAAATTAAGCAGCTAGTTACTGTATGTATCAAAAGGAGTGA ATTTGTCCTTTAATAATTAGCTTTCTTATCTTTTTTTGAGGCACTTAATGTTGTATATTTTGGTAACAGGTTGGACTTCAAGCTGAATATTCCTATGCTA GGAGTTTGGCTCGTTTTGCTGCAACTCTGGGACCTACTGCTTGGAAAATTGCTTCTGAGAAGATTCAGCAGGCACTCCCACCTGGATGTAAGTTTGGTCG TGGTTGGGTTGGAGAGTATGAACCACTTCCAGCCCCAGTGTCCATGTTTAATAATTGTGTTCACTTTAAAGAACCTAGTTTTGTAAAGATGCAGTCTACG AATGAGTCGATAAAGGTTGACAAAAACTGTAAGAATGTGGAACCCACCATACAACAACCTTTTAATGGACAAAGGTTTGAGGGGGAAAAGCCTTCAGTTC ATCCGGGTAGTGGGCCTACATCAGAAGGAAAACCATCTTTGTTTGGTTCTGTGGCAGTAAGACCAAACACTCCTGCCAATCTCCCTTATCAGCAACCCAA TGTCCAAATCAGGAACCCTGGCAAGTCGGTGAATAAGGGTTTAAAACAAATGGAATTGAACTCTTTACCACCAAGTGATCAGAATAATGCCAGTCTGGTT GCAAAGCTTACTAGTAATGCTCCCGCCGCTGTGTCAAAGCCCAGAGAGACGACACCAAGTAACACAAATATTTCGCCATCTATGCCTTTCAAGCAGTCAG ATACTAATGGTATTGTTAGCGGTAACTTGCCTAATGGAAAAGTCAGGAATGATAGTATGAATAGACGAATGCCTGCTCTATCTGAGAGTACATCAAATCA AACAGGCAGAGCAGCTCCCTTTATTGGCCATGGACCACCATCACCTCAAAGCACTTCAAATCAAACAGGAAGAGCAGTTCCCTTTTTCGCCCATGGACAA CCATCGCGTGAGAGCGCATTGAATCAGACAGGAAGAGAAGCTCCCTTTGTTTCCCATGGACAAGCATCACCTAGGAGCACACCACATCAGAAAGGAAGAG CAGCTCCTTTTGTTTCCCATGAACAACCATCATCTGAGAGCATATTGAATCAGACAGGAAGAGCAATTCCCTATGTTTCCCATGGACATCCATCACCCGA GAGCACATCAAATCAGACAGGAAGAGCATCTCCCTTTGTTTTCCATGGACAACCATCACCTGAGAGCATATCGAATCAAACAGGGAGAGCAGCTCCCATT TTTGCCCATGGACGATCATCACATGAGAGCACATCAAATCAGAAAGGAAGAGCATCTCCCTTTATTTCCCATGGACAACCGTCACCTGAGAGCACATTGA ATCAAACAGGAAGAGCAGATCCCTTCGTTGCCCATGGACAAGAGCAGAATCTTAGTGATCCAGTTCAGCTGATGAGGATGTTAGCCGAAAAGTCTCAAAA ACAACAACAGACTTCCAGTTCTTCCAATCACTCCTCTGTTGATATTCCACCACTGACACCATCTGTTCCATCTGGACGAAGAGATGGCACAGGCAATGCT ACAGGATCAGCTGCTCGGGCATGGATGTCTGTAGGAGCAGGAGGGATTAAACAAGGACCTGACAGTCCTCGTTCTAGTTCACCTAAAAATCAGATTTCCG CGGATTCATTGTATAACCCAGCGCGAGAGTTCCATCAGCATATGTCACAGATTAGGGGGGAGTTTCCGTCAAGCAGAATGTCTTTCCAGTCCGAGAAGAA CACTTTTCCATTTCATGCACTTGCACATCAACCTGTGCACCCAGTTGGTGTTTCTCAGTTTCAAAACCGACCTATGATTTTCCCTCAAGTAGCAGCACCC TCTGACCTATCAAGATTTCAAATGCAGCCCCCTTGGCAAGGTATCCGCCCTCATAGTCAACCAAAACAGAAACAGGGAACGCTTCCTCCTGACTTGAATA TCGGTTTCCAATCCCCTGGGTCACCTGCAAAGCAATCTTCTGGTGTGATGGTAGACTCACAGCAGCCGGACCTGGCTTTGCAACTATGATGTGTCGTTGC AATTTTGGTGTGGATGTTTCCACAAGAAATTGACTGGTAGTGTTTCCTACCATTGGATGCTGATTTTGTTCAGAATGCCTTGCATAAATGATGAAAGGGA TACCATTTTGAACTTATGGAAGAGATGAAATAAATACCATGTGCCAGGGAATATACTGTCCCTTGGATCTTATGGTTTTCTTGAGTGGGATTTGGATTTT GGCACAAGTTTGGTTAATATGAGTTTGCTTATGTTCAGAAGACAGTGGTGGATTTGGCAGAAGTTAACTCCATGTGACTTTCCATCTTTTCCAAATGAGG ATTGCCAAATGTATTGCAACATGTCCCTGATCTATCCTGGAGTTGTTGTAGCCATAGATTATGATCAATAGGGTTGCTTAGATTTTTCAATGAGCAGGTG AAAAATCATGTTGATGCCAGGCACATTCTTTACAAATGGATGATCTAATTCAGTTGTCTAGTTATTGATTCTATTTCATGATTACTTATGTATCCGAATT GGTGGTAGCTGGCATCACTTCTTAGTTCTTAATGCATGAGATTTACATATCACCAATGAAAAACCATAAGTGTTCCCTATATGCCACCCAAAAATCCTTC TGTTTTTCTTAGTTATGCTTTTTTTTTGCATACCTGTACAGTTTTTAACTTTGTGATTTATGTGTAAATAGTTAGTGAACAGTATGTCATTGAGTTTTGG TACAACCAAAATAGTATACAATTATCTTTGTTAAAGCATTCACTTCTTAAAGTCTTTAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_177869; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_404726
| Blastp | FMRFamide-related neuropeptides from Lymnaea with 26.51% of identity |
|---|---|
| Blastx | Bromodomain and PHD finger-containing protein 3 from Homo with 50% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019435601.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |