| Id Trinity | TRINITY_DN50529_c2_g1_i20 |
|---|---|
| Name Transcript | Ll_transcript_404748 |
| Sequence | TTACCTCGACGAAGAGGAAGAAGACGAAGATGAGAGAAGACGCGAGAAGAAGAAGCTCAAGCTTGTTACGAAGCTCAACCACGACGAGGATCATGATAAC AACAACAACGAGGATGAGGAAGATGAATTTGTGGAGAGGATGAAAGATGAGGAAATGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG AAGAAGAAGAGGAAGAAGGAAATGAAATTGATGTAGAGGAAAACCAAGATCAACAACAACAGCAAGAGGTTAAGGGCAGAAAAGTTGATTCTAAAGGGCT CCACTCTGTTTTAGGAACTCCACCAAAGATACTTCTTCCATCTGGCTCTGGAATTCCCTTGCCTGATAAGAGGACCCTTGAATTGATCCTTGACAAGCTT CAGAAGAAGGACACATATGGTGTGTATGCGGAGCCTGTTGATCCAGAGGAGCTTCCTGATTATCATGATGTGATTGACCATCCAATGGACTTTGCCACTG TCAGGAAGAAGTTGGAAAATGGATCTTATCCTACCTTAGAACAATTTGAGGTTTGTAAGTATGTCTCGGTTGTTCATGATTGGTGTTGTTGGAAATTTCT TTTCTTAGGTTTTGGTTATTTTTGCACTGCCATTCTACTGGGTTTGCATGTTGTCACTATGCACTTCTGCTTTTTTTCTTTAAATGGGAGAAAGTGTGCC ATACATTACTTGCATTTGACACTCAGATTGAATTAATTAAAGGCATGACTTTGTTTTTTCTTTTCTTAGTAAATTCAGCAAGGACTGCTACTGATATTGA TATATCCAGAAAAAGTGGGTTGTGAGCAAGAGACTGCCACACCTGTTGAACATCTGTCGAGCTATAGAGTAATAATGGGGATTATTTGGGTTTTTATAAT CCCCTAAATATGTTTTTCAACCTACTGATAGATTGAGTTTGGGAAAGACATAGAAGCTAGAAGCAATTTTGCTGTTTTCAGCTCCATTGCAATTTTGCTT GTTTTGGAATTGATAGATGATGCTCTTCCTCAGCCGGTGATAATAATATTACATCTGTGCTCTTAGGGACATAGAGCCCTAGAACTTTATCCTTATGGTT TGTTCTCACGTAGTCGTGTTAATTAACTTATAATAGGCACCCCAGACATTTCCTTAGATGTCTAATGTTATCAACAATGTAATTTACTAACTGGACGCTG TACTTTAATAAATACATAAACCTGTATTGTATTTGTGAGTGCACATGAATGATAAGCTTGAATTAAAAGTTAAGTTTTGTAGCAAATTTAGACACATTTT AAAATTAAAATGTTATAACTTTGTCAACTTGTATTTGTTCTTATTTAGGCTTTATGGACAAAATAAATAGGACTATGCTAGATATGGTAAACATCTAAGT ATACAATCCTTTTTATAATTTTTTGACATATATCCTACATTAACGAATAAAGGAAATTAGAGGCATTTATTTGCTTGCCTTCTATTCTATTATGAATAGC TTGCCTCTTTTTCATTTTCAAATGATTAACCTTGATATGTGCATGATCTTCTCTCATTTCTCTTTATTTGCAAAATTTCCTATTGTGGCTTTTCTTTGTA CACAGCCTGTGATTATCATTGTGATATTCAGTAAAGGCAAGAAATGAACTTCTTTCTTCACTGGTAGATCCCTTTATTGCATTAGAGTCCTTAGTTTCAT TTGTTCAATCATCTAAACTAATTTTAAACTGTGCTGCTGTGCATAGATATTGTTTTCCTGATTGAGTTGAATATTGAAAGGCATGAGATTTTACTGATAT TACCTTGACTTCTGAATGCATTTGTTGAATGCAGAGTGACATATTTTTGATTTGCTCAAATGCAATGCAATACAATGCAGTGGACACTATATACCACAAA CAGGCTCGATCAATACAAGAACTAGCACAAAAAAAATTTGAGAAGTTAAGGATTGACTTTGAACACTCTCATAGTGATCTGAAATCTTCTGATCAAAAAA TTAGATGTAATTCTTTGGTTAAGAAGCTTGCAAAGAAGCCACTGGGTGCTTCACAGGAACCTGTTGGCTCTGATTTCTCCTCAGGTGCAACTCTTGCTAC TATTGGAGATGTACAACCAACTTCCCATCCAATGCAAGGTGTCATCTATGAAAGGCGTGGCAATGCTGATGTCCTTGTGGAGGGCAATGCTTTCTTCATT GAAGCAAATCAAGAGAAAGCAGAAGATATTTTATCAGGTAGCGCAGAAGGGATCAAGCTCCTCTATCTGTTTTGTTACATGGTTCAATTCTTTGGATACT CTCAAAGTAGGATATTAATGTCAAGATCTAGCTGTTCTGTTTTGAATGTACCAATTTACTGTTTCAGGGAAGGGTATGCTCTCCAAGCTGGGAAGGAAGT CATCTTTGCAAGATTGTGAACCTCGTGCAACTTATAATATGTCTAATCATCCAATTACTAGATCAGATTCAATATTTATGACCTTTGAGAGTGAAATTAA GCAGCTAGTTACTGTTGGACTTCAAGCTGAATATTCCTATGCTAGGAGTTTGGCTCGTTTTGCTGCAACTCTGGGACCTACTGCTTGGAAAATTGCTTCT GAGAAGATTCAGCAGGCACTCCCACCTGGATGTAAGTTTGGTCGTGGTTGGGTTGGAGAGTATGAACCACTTCCAGCCCCAGTGTCCATGTTTAATAATT GTGTTCACTTTAAAGAACCTAGTTTTGTAAAGATGCAGTCTACGAATGAGTCGATAAAGGTTGACAAAAACTGTAAGAATGTGGAACCCACCATACAACA ACCTTTTAATGGACAAAGGTTTGAGGGGGAAAAGCCTTCAGTTCATCCGGGTAGTGGGCCTACATCAGAAGGAAAACCATCTTTGTTTGGTTCTGTGGCA GTAAGACCAAACACTCCTGCCAATCTCCCTTATCAGCAACCCAATGTCCAAATCAGGAACCCTGGCAAGTCGGTGAATAAGGGTTTAAAACAAATGGAAT TGAACTCTTTACCACCAAGTGATCAGAATAATGCCAGTCTGGTTGCAAAGCTTACTAGTAATGCTCCCGCCGCTGTGTCAAAGCCCAGAGAGACGACACC AAGTAACACAAATATTTCGCCATCTATGCCTTTCAAGCAGTCAGATACTAATGGTATTGTTAGCGGTAACTTGCCTAATGGAAAAGTCAGGAATGATAGT ATGAATAGACGAATGCCTGCTCTATCTGAGAGTACATCAAATCAAACAGGCAGAGCAGCTCCCTTTATTGGCCATGGACCACCATCACCTCAAAGCACTT CAAATCAAACAGGAAGAGCAGTTCCCTTTTTCGCCCATGGACAACCATCGCGTGAGAGCGCATTGAATCAGACAGGAAGAGAAGCTCCCTTTGTTTCCCA TGGACAAGCATCACCTAGGAGCACACCACATCAGAAAGGAAGAGCAGCTCCTTTTGTTTCCCATGAACAACCATCATCTGAGAGCATATTGAATCAGACA GGAAGAGCAATTCCCTATGTTTCCCATGGACATCCATCACCCGAGAGCACATCAAATCAGACAGGAAGAGCATCTCCCTTTGTTTTCCATGGACAACCAT CACCTGAGAGCATATCGAATCAAACAGGGAGAGCAGCTCCCATTTTTGCCCATGGACGATCATCACATGAGAGCACATCAAATCAGAAAGGAAGAGCATC TCCCTTTATTTCCCATGGACAACCGTCACCTGAGAGCACATTGAATCAAACAGGAAGAGCAGATCCCTTCGTTGCCCATGGACAAGAGCAGAATCTTAGT GATCCAGTTCAGCTGATGAGGATGTTAGCCGAAAAGTCTCAAAAACAACAACAGACTTCCAGTTCTTCCAATCACTCCTCTGTTGATATTCCACCACTGA CACCATCTGTTCCATCTGGACGAAGAGATGGCACAGGCAATGCTACAGGATCAGCTGCTCGGGCATGGATGTCTGTAGGAGCAGGAGGGATTAAACAAGG ACCTGACAGTCCTCGTTCTAGTTCACCTAAAAATCAGATTTCCGCGGATTCATTGTATAACCCAGCGCGAGAGTTCCATCAGCATATGTCACAGATTAGG GGGGAGTTTCCGTCAAGCAGAATGTCTTTCCAGTCCGAGAAGAACACTTTTCCATTTCATGCACTTGCACATCAACCTGTGCACCCAGTTGGTGTTTCTC AGTTTCAAAACCGACCTATGATTTTCCCTCAAGTAGCAGCACCCTCTGACCTATCAAGATTTCAAATGCAGCCCCCTTGGCAAGGTATCCGCCCTCATAG TCAACCAAAACAGAAACAGGGAACGCTTCCTCCTGACTTGAATATCGGTTTCCAATCCCCTGGGTCACCTGCAAAGCAATCTTCTGGTGTGATGGTAGAC TCACAGCAGCCGGACCTGGCTTTGCAACTATGATGTGTCGTTGCAATTTTGGTGTGGATGTTTCCACAAGAAATTGACTGGTAGTGTTTCCTACCATTGG ATGCTGATTTTGTTCAGAATGCCTTGCATAAATGATGAAAGGGATACCATTTTGAACTTATGGAAGAGATGAAATAAATACCATGTGCCAGGGAATATAC TGTCCCTTGGATCTTATGGTTTTCTTGAGTGGGATTTGGATTTTGGCACAAGTTTGGTTAATATGAGTTTGCTTATGTTCAGAAGACAGTGGTGGATTTG GCAGAAGTTAACTCCATGTGACTTTCCATCTTTTCCAAATGAGGATTGCCAAATGTATTGCAACATGTCCCTGATCTATCCTGGAGTTGTTGTAGCCATA GATTATGATCAATAGGGTTGCTTAGATTTTTCAATGAGCAGGTGAAAAATCATGTTGATGCCAGGCACATTCTTTACAAATGGATGATCTAATTCAGTTG TCTAGTTATTGATTCTATTTCATGATTACTTATGTATCCGAATTGGTGGTAGCTGGCATCACTTCTTAGTTCTTAATGCATGAGATTTACATATCACCAA TGAAAAACCATAAGTGTTCCCTATATGCCACCCAAAAATCCTTCTGTTTTTCTTAGTTATGCTTTTTTTTTGCATACCTGTACAGTTTTTAACTTTGTGA TTTATGTGTAAATAGTTAGTGAACAGTATGTCATTGAGTTTTGGTACAACCAAAATAGTATACAATTATCTTTGTTAAAGCATTCACTTCTTAAAGTCTT TAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_177869; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_404748
| Blastp | - |
|---|---|
| Blastx | Bromodomain and PHD finger-containing protein 3 from Homo with 50% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019435601.1) |
| Pfam | - |
| Rfam | - |
| GO | - |