| Id Trinity | TRINITY_DN50529_c2_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_404741 |
| Sequence | CTGTTTCAGGAACTCCATCAAAGCTGCTTCCATCTGGATCTGGAATTCCCTTGCCTGATAAGAGGACCCTTGAATTGATCCTTGACAAGCTTCAGAAGAA GGACACATATGGTGTGTATGCTGAGCCTGTTGATCCAGAAGAGCTCCCTGATTACCATGATGTAGTCGACCATCCCATGGATTTTGCCACTGTCAGGAAT AAGTTGGCAAATGGATCTTATCCTACCTTGGAACAATTTGAGAGTGATATATTTTTGATTTGCTCAAATGCAATGCAATACAATGCACCAGAGACTATAT ACCACAAACAGGCACGATCAATACAAGAACTTGCACGGAAAAAGTTTGAGAAGTTGAGAATTGACTTTGAACGCTCTCATAGTGAGCTGAAATCTTCCGA TCAAAAGACTAGGCCTAATTCTTTGGTTAAGAAGCTTGCAAAGAAGTCAGTGGGTGCTTCACAGGAACCTATTGGCCCTGATTTCTCCTCTGGTGCAACT CTTGCTACCCTTGGAGATGTACAACCAACTTCCCATCCAATGCAAGGTGTCATCTATGAAAGGCCTGGCAACGTTGACGGCCTCGTGGAGGGGAATGCTT TCTTCATTGACTCAAATCAAGAGAAAGCTGAAGACGTTTTATCAGGGAAGGGTACAGTCTCCAAGCTGGGAAGGAAGCCATCTGTGCAAGATTATGAACG TCGTGCAACTTATAATATGTCTAATCAACCAATTAGTAGATCAGATTCGATATTTACAACCTTTGAAAGTGAAATCAAGCAGCTAGTTACTGTCGGACTT CAAGCTGAATATTCTTATGCTAGGAGTTTGGCTCGTTTTGCTGCAACACTGGGACCTGCTGCTTGGGAAATTGCTTCCCAAAAGATTCAGCAGGCACTCC CACCTGGCTGTAAGTTTGGTCGTGGTTGGGTTGGAGAATATGAACCACCTCCAACCCCAGTATTAATATTTGATAATGTTGTCCAGAAAGAACCTAATCT GATAAAGAAGTTGCAGTCTACTACTGAATCAATAAAGGCTGACAAAAACAGTAAGAATGTGGAATCCACCACACAACAACCTGTTAATGGACCAATGGTT GAGGGAAAACAGCCTTCAGTTCATCCCGGCAGCTGGCCTACATTAGAAGGAAAACCATCTTTGTTTGGTTCTGTGGGTGTAAGACCCAACACTCCTGTCA ATCCCCCTCATCAGCAACCTAACGTCCAAACCAGGAACCTTGGCAAGTCCAAGAATAAGGGTTTGAAACAAGTAGAACTGAACTCTTTACCACCAACTGA TCAGAATAATGCGAGTCTAGTTGTGAAGCTTACCAATAATGCTCCTGCCTCTGCTACAAAACCCAGAGAGATGGTACCATGTAACACAAATATTTCACCA TCTATGCCTTTCAAGCAGCCAGATACTAATGGTGTTGTTAGTGGTGACATGCCTAATGGAAAAGTCAGGAATACTACTATGAATAGACGAATGCCTGGTC CATCTGAGAGTACATCAAATCAAACAGGCAGAACAGCTCCCTTTATTGTCCATGGACAACCATCACCTGAGAGCACATCAAATCAAACAGGAAGAGCAGC TCCCTTTTTTGCCCGTGGACAACCATCACGTGAGAGCACAACGAATCAGATAGGAAGAGCAGCTGCCATTGTTTCCCATGGGCAACCATCACCTGAGAGC ACATCAAATCAGACAGGAAGAGCAGTTCACTTTGTTTCCCATGGACAACCATCACCTGAGAACACATTGAATCAAACAGGAAGAGCAGCTCCATTTGTTA CCCATGGACAAGAGCAGAGTCTTAGTGACCCAGTTCAGCTGATGAGGATCTTAGCCGAAAAGGCTCAAAAACAACAACAAACTTCCAGTTCTTCTAATCA TTCCCCTGTTGATACTCCACCAGGGGTACCATCTGGACAGAGAGATGGCACGGGCAACGCTTCAGCAGCAGCTGCCCGGGCATGGATGTCTGTAGGAGCA GGAGGGTTTAAACAAGGGCCTGAGAGTCCTAGTCCTAATTCACCCAAAAATCAGATTTCTGCAGATTCATTGTATAATCCAGTGAGAGAGTTCCATCAGC ATATGTCACGAATTCGCGGGGAGTTTCCGTCTACTGGAATGTCTTTCCAGTCCGATAAGAACAATTTTCCATTTCAGGCACTTGCACATCAACCTATGCA CCCCGTTAGTGTTTCTCAGTTTCAAAACCGACCGACTGTTTTCCCTCAAGTAGCAGCACCCTCTGACCTGTCAAGATTTCAAATGCAACCACCTTGGCAA GGTATCCGGCCTCCTAGTCAACCGAGACAGAAACAGGAAACACTTCCTCCCGACTTGAATATTGGTTTCCAATCTCCCGGGTCACCTGTGAAACAATCTT CCGGTGTGATGGTTGACTCACAGCAACCAGACCTAGCGTTGCAACTATGAATTGCATTGCAATTTTGGTGGGCATGTTTCCGTAAGAACTTGTTTATGGA ATTTTCATCTCCTGTCATAGGATGTTGATTTTGATTCAAAGAGCCTTGCATGAATGAGGAAAGGGCTACCATTTTGTACTTCTGGAAGAGATGAAAAAAA TATCATGTGCCAGGGAGATACTATCCCTTGGATCTTATGGTTTTCTTGAGTGGGATTTGGCTTTTGGCACAAGGCTGGTCAAAATCAGTTTGTTTGCATT TAGAAGACACTGGTGAATTTGGCAGACAGAAGTTAACTCCATGCGACTTTCCTTCTTTTCCAAATATCGATTATTAAGATATTGCAGCGTGTTCCTGTTC TATCCAGGAGTTGTAACCCTAGGTTGTTATTAATTGATGATTATGATCAACAGCAGTGCTTAGATTTTTCAATTTGCTGGCGAAAAATGCTATTGATGCC GTGTACATTCTTTACAAATGGGTGATGAAATTTAGTTGTCTAGATATTAATTTCCTTTGATGATTACTAATGTATCTGAATTGGTGGTAAGGCAATAGCA TGCACATGAGATTTACATGTCACCAATGCAAAACCATAAGTATGCTTGCCATTTCATCAAAAATTGTTCTGTTTTTTTCATCTCTGTATTGTTGCTTCTC TGTGTATATGCTCAGATTTATCTGAGATAGTGTTTCATTCCTCATCATCTCAGTTGAAAATGTGATTATTATATTTTTTAAAAAGAAAATCAATTTACCA GGTGTTCTATCATGAAGAAACGGGATCGTTTTAGGTCTCAAGTCAGAGTCTCCCAATATGCTGCTTGTCCACTATATGCAGGAAATGTTGCAGGAAATGT AATAAAAGTAAAGCTAATCTGCAACATATATTACTCTCTGTTTAATTTTAATTATAGTTTTGGAATATGTAGTTTTATTTTAATTGAAGAGTTGACCATT TTTTGTCATG BLAST |
| Tissue | pods |
| Gene name | LI_gene_177870; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_404741
| Blastp | Bromodomain-containing protein 7 from Mus with 37.97% of identity |
|---|---|
| Blastx | Bromodomain and PHD finger-containing protein 3 from Homo with 42.61% of identity |
| Eggnog | bromodomain containing(ENOG410XRRI) |
| Kegg | Link to kegg annotations (26992) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019455999.1) |
| Pfam | Bromodomain (PF00439.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |