Ll_transcript_404263

• Id Trinity: TRINITY_DN50534_c2_g2_i5
• Name Transcript: Ll_transcript_404263
• Sequence: TTTTTTAATCGAAAATGTTTGGGATAGTACCGAAGAAGAGTGATAACACCAGATACTATGAAATTCTCGGTGTTTCCAAGAACGCTGCTCAGGATGATCT CAAAAAGGCTTATAGGAAAGCTGCAATTAAGAATCACCCTGATAAGGGTGGTGATCCTGAAAAGGTTTATATTTTCCCTATTTTTCTTTGATTTGTTATT TTTTATTAAATTTAGTGATCTAGGGTTATTTATTCAGCTAATTATATTACATAATGGTGTAATTACATAATTGTATGATTCTCAATGGTAAACTGTGAAT TGTTGCGAATACTGTGATAGAGTTAAGATTTTTAACAAGGTTTTCGTCTTTCATGGGTTTGTTTAATTAAATATGTAGACGATTTTAGAATTTGTGTTCG TTTACCAAGGATTAGAGATTTACTGTTACTTTGGTGGTGATTTACTTTACTGGTACTTTGGTGGTGTTAGTTTACAGTTTCAGTTCATGCCGCTCTTTGA AAAGCAAGTGCATACTTGTTATTTGGGTTTTTTAATTTTAGTTTCTTTATGGGATGTAGTTCAAAGAGCTTGCCCAAGCTTACGAGGTTCTGAGTGACCC TGAGAAGCGTGAGATATATGATCAATATGGTGAAGACGCTCTTAAGGAAGGAATGGGTGGTGGTGGCGGTGGACATGACCCCTTTGACATCTTCAGTTCT TTCTTTGGAGGGGGTGGAGGTCCATTCGGTGGTGGTAGCAGCCGAGGACGGAGGCAGAGACGCGGAGAAGATGTGGTTCACCCTCTCAAGGTCAGCTTGG AGGACCTTTACAGTGGGACATCTAAGAAGCTCTCCCTCTCTAGAAATGCCCTATGCTCAAAGTGCAATGGGAAAGGGTCTAAGTCCGGTGCTTCCATG
• Tissue: pods
• Gene name: LI_gene_177909;
• Additional information: -

Expression of Ll_transcript_404263

FPKM

• PAB: 1.2
• PNAB: 0.4
• PS1: 0.1
• PS2: 0
• PS3: 0.1
• PW1: 0.3
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_404263

• Blastp: -
• Blastx: Chaperone protein dnaJ 3 from Arabidopsis with 83.19% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT3G44110)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413945.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;