| Id Trinity | TRINITY_DN50537_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_404513 |
| Sequence | TATAATGTGAACCATAGAGGCGTAGACACAAGTGTGTAGTTTCTGAGTTAGAAAAGTCAAATTGATCGTGCAGTGCTCATTGTTTCTTCCTTCCATAAGA AGCAAGGTTAAAGTGTTATCTGGGTTCAATTCAATTTTGATTTTGGAGTTGAAAAGGTTTGAACTTGTTTTAGTTTATTGTTCTCTATGGATGTTAAGGA TAATAATTCTATGATTCCTGAGTTAGAAAGAGAGGAGAATCTAATTGCTGCAGCAAGACATATTATTAAGGCATTAGGGTCAAATAATAACCTTACTAGT GATGCCAAGAAAATTCTTGCAGATCTTGGTTCCCAATTATCCTCCATCAGCATCTCTAATGATAAGGATGAGGATGATGATGATGAGGAGGATTGTAATG AAATCGAAACTCGGTTCGGAGTAATTCATGAGAAGATAATGAGATGGGATGAAGATCAGTCTATGATCTGGGATTTGGGACCTGAGGAAGCATCTGATTA TCTGAATGCTGCTAACGAGGCCCGAGAATTGGTCGAAAAAATGGAGAGTTTGCAATTGAGTAAAGAGGACAAAGAGCATGAGTTTTTGCTGAGGGGTTAT AGTGTTCTTCAATCAGCTATGTCAAGGCTTGAAGAAGAGTTTAGGAATTTGCTTATCCAGAATAGGCAACCTTTTGAACCGGAGTACGTGTCTTTCCGGT CTATTGAAGAAGATGTTATTGATGGGAATTCCATGGTTTCTTTTGGTGATGAATCAATTGAGGAATCACTTCGAAGAGACAGTGTTAGCCGAGCCTCGGA GGAGCTTATCATTGATTTAGTGCATCAGGATGTGATACCGGATCTAAGGTGTATTGCAAACTTATTGTTTGCTTCTAATTATGTCCAGGAATGTTCACAT GCTTATACTATTGTCCGAAGGGATGCTTTAGAAGAGTGCCTCTTCGTTCTTGAAATGGAACGGTTGAGTATCGAGGATGTCTTGAGGATGGAGTGGGGTA CTTTAAATTCGAAAGCCAAAAGATGGATTTGGGCTGTGAAGATATTTGTTCGGGTGTATCTTGCTAGTGAGAGATGTCTTAGTGACCAGATTTTCGGGGA GGGTGGACCTGTTAGTATAGCTTGTTTTGTTGATGCGTCCAAGGCTTCGATATTGCAGATTATGAATTTCGCAGAAGCTATTACCATCAGCCCTCGCCAA CCGGAGAAATTGTTTCGAATTCTTGACATGTATGAGGTTCTAGCAGACCTTATGTCAGACATTGATGCCTTGTATTCGGATGAGGTTGGCTCTTATGTTA AAGTTGAATGTCACGAGGTTCTTAACAGATTAGGCAATTGTGTGACGGCAACATTTCTTGAATTCGGAAATGCCATTGCATCCAATGCATCATCAACCGC TTTCGTTGGTGGTGGGATACACCCTTTGACCAAATATGTTATGAATTATCTTGTGCTTCTTACTGACTACAATGAAACACTTAATCTGCTTCTGAAGGAC CAAGAAGAACAGGATGCCCTTTCACTGTCACCTGACATGAGTCCAGGTACAGAAGAGGATAGCAAAAGCCGGGGATCTCCGGATAGAGTTTCCTCGATGG CCCTTCACTTCAGATCAGTTGCCTCAATCTTGGAATCCAACCTTGAGGACAAGTCCATGTTATATAGAGAGGCTCCCTTGCAGCACTTATTCTTGATGAA TAACCTACATTATATGGCTGAAAAGGTCAAGGGTTCTGACCTTAGGCGCATATATGGAGATGAATGGATTCGAAAGCGCAACTCGAAGTTTCAGCGGCAT GCAAGGAAATATGAGAGAGCTAGTTGGAGTTCCATTCTCAACTTGCTTAAGGATGAGGGAATCCATGTTCCAGGTACAAATTCTATCTCAAAAAGTCTTC TTAAGGAGAAGCTAAGGAGCTTCTACATTGGCTTTGAGGATATTTACAGGATCCAAACAGCTTGGCATATCCCCGATGTTCAGCTTCGCGATGACTTGAG GATTTCGACTTCCCTCAATGTAATCCAAGCTTATAGGACATTTGTTGGAAGGCATAATAGTCACATAAGTGACAAATACATTAAATACTCCGCCGATGAT TTAGAAAATTACCTTTTTGATTTCTTTGAGGGGAATTCAAAAATTGTTGCAAAATCCTCATAGGGGAGGTGATATGTAATAATAATCCTGTTTTCTAACA GGGGTTTGTAGCTGTATTGTAAGAAACAGGTTAGGTCCATGCCAAAACCTTGTTCCACTTAGTGTGCATTATATGTATTCTTATTCAATGATTGAAAGAG TTTCCGATTTATGCTGCTTTTTTTTTCTGTGTCTTCTTTACATTACTTAAGTTTAGGGAGCATTTGGGTTTTCATTTTCATTGTATTACTACTCAAAATT TCTCTGCCCAAATATAAGAATATGCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_177933; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_404513
| Blastp | Exocyst complex component EXO70E2 from Arabidopsis with 40.75% of identity |
|---|---|
| Blastx | Exocyst complex component EXO70E2 from Arabidopsis with 40.59% of identity |
| Eggnog | exocyst complex(ENOG410YIGI) |
| Kegg | Link to kegg annotations (AT5G61010) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413646.1) |
| Pfam | Exo70 exocyst complex subunit (PF03081.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |