Ll_transcript_402262

• Id Trinity: TRINITY_DN50540_c0_g1_i3
• Name Transcript: Ll_transcript_402262
• Sequence: TGGCCTTGGCTGAGGAAATAGAATTTTTCAAGGAAGGTCTAATAGTTGGAAAAACCAAGGATGATTGCCAAGATCAGTGGAAAAAAGCTTTCACCAATTG TTTTTTAAAGGTTGATGCTGTAGTTGGGGGAAGTTCTAATTGTAATTCTGTTGCCCCAGAAAATGTTGGATCCGCTGCTGTTGTTGCTGTTATCTGTTCA TCTCATATCATAGTTTCAAATTGTGGTGATTCAAGAGCGGTTCTCTGTCGTGGTAAAGAACCCATGGCATTGTCCGTCGACCATAAAGTAGGCTACCTCC AATTATAATTTTGCATCTCCCTTCAACATAATAATGTTTTAGCTAATTAGAAAAAACAATGATCATGTCTGGTTCATTATATGGTAGCCAAATCGAGATG ATGAATATGCAAGAATTGAGGCAGCTGGAGGCAAGGTGATACAATGGAATGGTCATCGTGTATTTGGTGTGCTTGCAATGTCTAGGTCCATAGGCGATAG ATATTTGAAACCATGGATTATTCCAGAACCAGAAGTTACATTTCTTCCTCGTGCCAAAAACGACGAATGTCTGATTCTGGCCAGTGATGGTCTGTGGGAT GTAATGACAAACGAAGAAGCATGTGACATAGCTCGGAGACGAATACTTCTCTGGCACAAGAAAAATGG
• Tissue: pods
• Gene name: LI_gene_177957;
• Additional information: details;

Expression of Ll_transcript_402262

FPKM

• PAB: 5.6
• PNAB: 2.2
• PS1: 1.9
• PS2: 2.1
• PS3: 0.2
• PW1: 4.8
• PW2: 7.5
• PW3: 8.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_402262

• Blastp: Protein phosphatase 2C 7 from Arabidopsis with 57.55% of identity
• Blastx: Probable protein phosphatase 2C 6 from Oryza sativa with 86.02% of identity
• Eggnog: Phosphatase(COG0631)
• Kegg: Link to kegg annotations (AT1G17550)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415431.1)
• Pfam: Protein phosphatase 2C (PF00481.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;